Detailed information NTG0826358

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: SE700_RS04985
• Genome accession: NZ_CP138427
• Coordinates: 870756..872165 (+)
• Length: 469 a.a.
• NCBI ID: WP_001188775.1
• Uniprot ID: -
• Organism: Escherichia coli strain 21EVA
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 865756..877165

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SE700_RS04970	typA	865804..867627 (-)	1824	WP_000570668.1	ribosome-dependent GTPase TypA	-
SE700_RS04975	glnA	868000..869409 (+)	1410	WP_001271717.1	glutamate--ammonia ligase	-
SE700_RS04980	glnL	869695..870744 (+)	1050	WP_000190577.1	nitrogen regulation protein NR(II)	-
SE700_RS04985	luxO	870756..872165 (+)	1410	WP_001188775.1	nitrogen regulation protein NR(I)	Regulator
SE700_RS04990	yshB	872277..872387 (+)	111	WP_000893994.1	YshB family small membrane protein	-
SE700_RS04995	hemN	872577..873950 (-)	1374	WP_000116090.1	oxygen-independent coproporphyrinogen III oxidase	-
SE700_RS05000	yihI	874139..874645 (-)	507	WP_001300530.1	Der GTPase-activating protein YihI	-
SE700_RS05005	-	874764..874930 (-)	167	Protein_825	hypothetical protein	-
SE700_RS05010	yihA	875227..875859 (+)	633	WP_000183349.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-

Sequence

Protein

• Length: 469 a.a.
• Molecular weight: 52249.72 Da
• Isoelectric Point: 6.4081

>NTDB_id=826358 SE700_RS04985 WP_001188775.1 870756..872165(+) (luxO) [Escherichia coli strain 21EVA]
MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVII
MTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQQQPRNIQLNGPTTDIIGEAPAMQDVFRIIGRLSRS
SISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDE
IGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPR
LARHFLQVAAHELGVEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESTVAESTSQMQPD
SWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME

Nucleotide

• Length: 1410 bp

>NTDB_id=826358 SE700_RS04985 WP_001188775.1 870756..872165(+) (luxO) [Escherichia coli strain 21EVA]
ATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGTTGGGTGCTTGAACGTGCGCTCGCTGGAGCGGG
TTTAACCTGTACGACATTTGAGAACGGCGCGGAAGTACTGGAGGCGCTGGCGAGCAAAACGCCGGATGTGCTGCTTTCAG
ATATCCGTATGCCGGGAATGGACGGGCTGGCGCTGCTCAAGCAGATTAAACAGCGCCATCCAATGCTTCCGGTCATCATT
ATGACCGCACATTCCGATCTGGATGCTGCCGTCAGCGCCTATCAACAAGGGGCGTTTGATTATCTGCCCAAACCGTTTGA
TATCGACGAAGCAGTGGCGCTGGTTGAGCGCGCTATCAGTCATTACCAGGAACAGCAGCAGCCGCGTAATATTCAGCTTA
ACGGCCCAACGACCGATATCATCGGCGAAGCGCCAGCCATGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCT
TCTATTAGCGTGCTGATTAACGGCGAATCCGGCACCGGTAAAGAACTGGTCGCTCATGCCCTGCATCGCCACAGTCCGCG
CGCCAAAGCGCCGTTTATCGCGCTGAATATGGCAGCTATCCCAAAAGATTTGATCGAATCAGAACTGTTTGGCCACGAGA
AAGGCGCGTTTACTGGCGCGAATACCATTCGTCAGGGGCGTTTTGAACAGGCCGATGGCGGTACATTATTCCTCGACGAA
ATTGGTGATATGCCGCTGGATGTGCAGACGCGTTTGCTGCGCGTGCTGGCAGACGGTCAGTTTTACCGCGTTGGCGGCTA
TGCGCCGGTGAAAGTGGATGTGCGGATTATCGCTGCCACTCACCAGAATCTCGAACAGCGAGTGCAGGAAGGTAAGTTCC
GTGAGGATCTGTTCCACCGCCTGAACGTTATCCGCGTTCATCTGCCGCCGCTGCGCGAACGTCGGGAAGATATTCCCCGT
CTGGCGCGCCATTTTTTACAGGTTGCCGCGCACGAACTGGGCGTAGAAGCGAAGTTACTGCATCCGGAAACCGAAGCTGC
TCTGACGCGTCTGGCGTGGCCAGGCAACGTGCGCCAGCTGGAAAACACCTGCCGCTGGCTAACGGTGATGGCCGCCGGGC
AGGAAGTGTTGATTCAGGATTTGCCCGGCGAACTGTTTGAATCAACGGTTGCGGAGAGTACTTCGCAAATGCAACCGGAC
AGTTGGGCGACGCTTCTTGCGCAGTGGGCAGACAGAGCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGCC
AGAGCTGGAGCGGACGTTACTGACGACCGCGTTGCGACATACGCAGGGGCATAAACAGGAAGCGGCGCGGCTACTCGGCT
GGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGATGGAGTGA

Domains

Predicted by InterProScan.

• Bacterial regulatory protein, Fis family (HTH_8) (427-466)

• Response regulator receiver domain (Response_reg) (6-115)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	39.871	98.934	0.394
pilR	Pseudomonas aeruginosa PAK	39.066	100	0.392