Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   QJV49_RS06460 Genome accession   NZ_CP124538
Coordinates   1282676..1283962 (-) Length   428 a.a.
NCBI ID   WP_225512496.1    Uniprot ID   A0AA49IPS5
Organism   Lactococcus sp. NH2-7C     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1277676..1288962
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QJV49_RS06445 (QJV49_06445) - 1278866..1279402 (-) 537 WP_225512499.1 hypothetical protein -
  QJV49_RS06450 (QJV49_06450) - 1279409..1280740 (-) 1332 WP_225512498.1 FAD/NAD(P)-binding oxidoreductase -
  QJV49_RS06455 (QJV49_06455) - 1280756..1282606 (-) 1851 WP_225512497.1 proline--tRNA ligase -
  QJV49_RS06460 (QJV49_06460) eeP 1282676..1283962 (-) 1287 WP_225512496.1 RIP metalloprotease RseP Regulator
  QJV49_RS06465 (QJV49_06465) - 1283981..1284784 (-) 804 WP_225512495.1 phosphatidate cytidylyltransferase -
  QJV49_RS06470 (QJV49_06470) - 1284784..1285518 (-) 735 WP_225512494.1 isoprenyl transferase -
  QJV49_RS06475 (QJV49_06475) yajC 1285883..1286215 (-) 333 WP_003130588.1 preprotein translocase subunit YajC -
  QJV49_RS06480 (QJV49_06480) - 1286310..1287008 (-) 699 WP_225512493.1 DNA alkylation repair protein -
  QJV49_RS06485 (QJV49_06485) rlmH 1287032..1287511 (-) 480 WP_003130585.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46454.95 Da        Isoelectric Point: 6.2646

>NTDB_id=826337 QJV49_RS06460 WP_225512496.1 1282676..1283962(-) (eeP) [Lactococcus sp. NH2-7C]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSNSEVINLEAENSVSNIVRRINLSEHVELEEAIPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIAPLDVQYQSAGIFHKMLTNFGGPLNNFILGTIAFIVLTFVQGGVPSTTNAIGQVEKGTPAYNAGLKAGDKIEAV
NGTKTADWNNVVTEISGSKGKELKLEVSRSGKSETLSVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVQAGQSATAIFKA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGFPAIVYLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSQEKES
IITMLGVVFMLVLFVAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=826337 QJV49_RS06460 WP_225512496.1 1282676..1283962(-) (eeP) [Lactococcus sp. NH2-7C]
TTGATAGAAACACTGATTACTTTTATTATTATCTTTGGTATTATTGTCGCTATCCATGAATATGGCCACCTTTGGTGGGC
AAAACGTTCAGGAATTTTAGTGCGTGAATATGCCGTTGGAATGGGCCCGAAAATTTTTGCTCACCAAGCAAAAGATGGGA
CACTTTACACGATAAGAATTCTTCCCCTCGGTGGCTATGTTCGTTTGGCTGGTTGGGGTGATGACAAGACTGAAATCAAA
AAAGGACAAGCTGCAAGTCTTGTTGTCAGTAACTCTGAAGTAATAAATCTAGAAGCTGAAAATTCTGTCAGTAATATCGT
CAGAAGAATTAATCTGTCAGAACATGTTGAATTAGAAGAAGCAATTCCAATGTTGATTACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTTTTTGGGGAAATCAAACGTTATTCTGTTGATCATGATGCAACAATCATTGAAGAAGAT
GGAACAGAAGTTCGGATTGCACCACTCGATGTTCAATATCAATCAGCCGGTATCTTTCATAAAATGTTGACAAACTTCGG
TGGTCCTTTGAATAACTTTATTTTAGGAACCATTGCTTTTATCGTCCTAACCTTTGTTCAAGGAGGCGTTCCTTCAACTA
CTAATGCTATTGGCCAAGTTGAAAAAGGAACACCCGCTTACAATGCAGGCTTAAAAGCTGGTGATAAAATTGAAGCAGTC
AATGGAACTAAAACGGCAGATTGGAACAATGTTGTTACTGAAATTTCAGGTTCTAAAGGAAAAGAATTAAAACTTGAAGT
TAGCCGTTCAGGCAAATCGGAAACCTTATCAGTTACACCTAAAAAAATGGACGGAAGTTACCGTGTTGGCATTATGCAAT
CAATGAAAACAGGTTTCTTTGATAAGATTACAGGTGGCTTTGTTCAAGCAGGCCAATCAGCTACAGCAATCTTTAAAGCT
TTAGGAAGTTTGATTGCACGACCGAGTCTTGACAAACTTGGTGGCCCAGTTGCTATTTATCAGCTGAGTGGTCAAGCTGC
AAGAGCAGGTTTTCCAGCTATTGTCTATCTTTTAGCTATGCTTTCAATTAATTTAGGGATTGTCAATCTTTTCCCTATTC
CAGTACTTGATGGTGGAAAAATTGTCTTAAATATTATTGAAGCAATTCGTGGCAAAGCACTCTCACAAGAAAAGGAATCA
ATCATCACAATGCTGGGAGTTGTCTTCATGCTTGTGCTCTTTGTAGCAGTAACATGGAATGATATTCTCCGAGCCTTTGT
AAATTAA

Domains


Predicted by InterproScan.

(218-269)

(7-413)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.613

100

0.57

  eeP Streptococcus thermophilus LMD-9

56.381

100

0.568