Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   QJV49_RS04095 Genome accession   NZ_CP124538
Coordinates   847426..848127 (-) Length   233 a.a.
NCBI ID   WP_004255173.1    Uniprot ID   S6FFV7
Organism   Lactococcus sp. NH2-7C     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 842426..853127
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QJV49_RS04075 (QJV49_04075) - 842536..843753 (-) 1218 WP_225511904.1 cysteine desulfurase -
  QJV49_RS04080 (QJV49_04080) sufD 843753..845009 (-) 1257 WP_225511952.1 Fe-S cluster assembly protein SufD -
  QJV49_RS04085 (QJV49_04085) sufC 845147..845917 (-) 771 WP_225511903.1 Fe-S cluster assembly ATPase SufC -
  QJV49_RS04090 (QJV49_04090) - 846092..847423 (-) 1332 WP_225511902.1 glycosyltransferase family 4 protein -
  QJV49_RS04095 (QJV49_04095) mecA 847426..848127 (-) 702 WP_004255173.1 adaptor protein MecA Regulator
  QJV49_RS04100 (QJV49_04100) - 848258..848992 (-) 735 WP_225511901.1 amino acid ABC transporter ATP-binding protein -
  QJV49_RS04105 (QJV49_04105) - 848992..849678 (-) 687 WP_004255158.1 amino acid ABC transporter permease -
  QJV49_RS04110 (QJV49_04110) - 849826..850734 (-) 909 WP_225511899.1 diacylglycerol kinase family protein -

Sequence

Protein


Download         Length: 233 a.a.        Molecular weight: 27077.46 Da        Isoelectric Point: 4.1246

>NTDB_id=826321 QJV49_RS04095 WP_004255173.1 847426..848127(-) (mecA) [Lactococcus sp. NH2-7C]
MKYEDINENTIKITLSFDDLTDYDIKLSDFFGNQEVIEQFFYELVDELGLENRFGNVGMLTFQIQPFPQGVHMIVHEEAM
LGEGGEIPDDPEEFEELMTGFYNKLNEIGADMARERGITDFKPGLGLPGTKKDEAEQEPDFIYYSIRYEDIMSVLTGIKN
VKFADEESEFYRYDGNFYLVVLDNQKEKGKMHVESTRSRMMEYGEATKMSREFLQEYGECLIATRALDVLRKI

Nucleotide


Download         Length: 702 bp        

>NTDB_id=826321 QJV49_RS04095 WP_004255173.1 847426..848127(-) (mecA) [Lactococcus sp. NH2-7C]
ATGAAGTATGAAGATATTAACGAAAACACTATAAAAATCACCTTGTCTTTTGATGATTTGACAGATTATGACATCAAATT
ATCAGACTTTTTCGGTAACCAAGAAGTGATTGAGCAATTTTTCTATGAATTGGTCGATGAACTTGGTTTAGAAAATCGTT
TTGGAAATGTTGGAATGTTAACTTTCCAAATTCAACCTTTTCCTCAAGGGGTTCACATGATTGTTCATGAAGAAGCGATG
TTAGGGGAAGGTGGAGAAATACCAGATGACCCAGAAGAGTTTGAAGAATTGATGACTGGTTTTTATAATAAATTAAATGA
AATAGGGGCAGATATGGCGCGCGAGCGAGGAATTACTGATTTTAAACCTGGGCTTGGTTTACCAGGAACAAAAAAAGACG
AAGCTGAACAAGAGCCAGATTTTATTTATTACTCTATTCGTTATGAAGATATTATGTCTGTCTTAACAGGAATAAAGAAT
GTAAAGTTTGCTGACGAAGAATCAGAGTTTTATCGTTATGATGGTAATTTTTATCTTGTTGTCTTGGATAATCAAAAAGA
AAAAGGCAAGATGCATGTTGAAAGCACCCGTTCACGAATGATGGAATATGGGGAAGCAACAAAAATGAGTCGAGAATTTT
TGCAGGAGTATGGTGAATGTCTTATTGCGACACGTGCTTTAGATGTTCTTAGAAAAATCTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-230)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB S6FFV7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. lactis strain DGCC12653

99.571

100

0.996
  mecA Lactococcus lactis subsp. cremoris KW2

96.996

100

0.97