Detailed information NTG0825858

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: SE699_RS00510
• Genome accession: NZ_CP138399
• Coordinates: 112758..114167 (+)
• Length: 469 a.a.
• NCBI ID: WP_001188776.1
• Uniprot ID: Q3YVA5
• Organism: Escherichia coli strain 64EVA
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 107758..119167

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SE699_RS00495	typA	107807..109630 (-)	1824	WP_319755131.1	ribosome-dependent GTPase TypA	-
SE699_RS00500	glnA	110003..111412 (+)	1410	WP_001271717.1	glutamate--ammonia ligase	-
SE699_RS00505	glnL	111697..112746 (+)	1050	WP_000190577.1	nitrogen regulation protein NR(II)	-
SE699_RS00510	luxO	112758..114167 (+)	1410	WP_001188776.1	nitrogen regulation protein NR(I)	Regulator
SE699_RS00515	yshB	114279..114389 (+)	111	WP_000893994.1	YshB family small membrane protein	-
SE699_RS00520	hemN	114618..115991 (-)	1374	WP_000116090.1	oxygen-independent coproporphyrinogen III oxidase	-
SE699_RS00525	yihI	116180..116689 (-)	510	WP_001295266.1	Der GTPase-activating protein YihI	-
SE699_RS00530	-	116808..116974 (-)	167	Protein_101	hypothetical protein	-
SE699_RS00535	yihA	117271..117903 (+)	633	WP_000183349.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-

Sequence

Protein

• Length: 469 a.a.
• Molecular weight: 52268.77 Da
• Isoelectric Point: 6.4561

>NTDB_id=825858 SE699_RS00510 WP_001188776.1 112758..114167(+) (luxO) [Escherichia coli strain 64EVA]
MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVII
MTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQQQPRNIQLNGPTTDIIGEAPAMQDVFRIIGRLSRS
SISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDE
IGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPR
LARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESTVAESTSQMQPD
SWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME

Nucleotide

• Length: 1410 bp

>NTDB_id=825858 SE699_RS00510 WP_001188776.1 112758..114167(+) (luxO) [Escherichia coli strain 64EVA]
ATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGTTGGGTGCTTGAACGTGCGCTCGCTGGAGCGGG
TTTAACCTGTACGACATTTGAGAACGGCGCGGAAGTACTGGAGGCGCTGGCGAGCAAAACGCCGGATGTGCTGCTTTCAG
ATATCCGTATGCCGGGAATGGACGGGCTGGCGCTGCTCAAGCAGATTAAACAGCGCCATCCAATGCTTCCGGTCATCATT
ATGACCGCACATTCCGATCTGGATGCTGCCGTCAGCGCCTATCAACAAGGGGCGTTTGATTATCTGCCCAAACCGTTTGA
TATCGACGAAGCAGTGGCGCTGGTTGAGCGCGCTATCAGTCATTACCAGGAACAGCAGCAGCCGCGTAATATTCAGCTTA
ACGGCCCAACGACCGATATCATCGGCGAAGCGCCAGCCATGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCT
TCTATTAGCGTGCTGATTAACGGCGAATCCGGCACCGGTAAAGAACTGGTCGCTCATGCCCTGCATCGCCACAGTCCGCG
CGCCAAAGCGCCGTTTATCGCGCTGAATATGGCAGCTATCCCAAAAGATTTGATCGAATCAGAACTGTTTGGCCACGAGA
AAGGCGCGTTTACTGGCGCGAATACCATTCGTCAGGGGCGTTTTGAACAGGCCGATGGCGGTACATTATTCCTCGACGAA
ATTGGTGATATGCCGCTGGATGTGCAGACGCGTTTGCTGCGCGTGCTGGCAGACGGTCAGTTTTACCGCGTTGGCGGCTA
TGCGCCGGTGAAAGTGGATGTGCGGATTATCGCTGCCACTCACCAGAATCTCGAACAGCGAGTGCAGGAAGGTAAGTTCC
GTGAGGATCTGTTCCACCGCCTGAACGTTATCCGCGTTCATCTGCCGCCGCTGCGCGAACGTCGGGAAGATATTCCCCGT
CTGGCGCGCCATTTTTTACAGGTTGCCGCGCGCGAACTGGGCGTAGAAGCGAAGTTGCTGCATCCGGAAACCGAAGCTGC
TCTGACGCGTCTGGCGTGGCCAGGCAACGTACGCCAGCTGGAAAACACCTGCCGCTGGCTAACGGTGATGGCCGCCGGGC
AGGAAGTGTTGATTCAGGATTTGCCCGGCGAACTGTTTGAATCAACGGTTGCGGAGAGTACTTCGCAAATGCAACCGGAC
AGTTGGGCGACACTTTTAGCGCAGTGGGCAGACAGAGCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGCC
AGAGCTGGAGCGGACGTTACTGACGACCGCGTTGCGACATACGCAGGGGCATAAACAGGAAGCGGCGCGGCTACTCGGCT
GGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGATGGAGTGA

Domains

Predicted by InterProScan.

• Response regulator receiver domain (Response_reg) (6-115)

• Bacterial regulatory protein, Fis family (HTH_8) (427-466)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

3D structure

• AlphaFold DB: Q3YVA5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	39.871	98.934	0.394
pilR	Pseudomonas aeruginosa PAK	39.066	100	0.392