Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   SE087_RS01915 Genome accession   NZ_CP138360
Coordinates   408103..408948 (+) Length   281 a.a.
NCBI ID   WP_319090874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 17CS1042     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 403103..413948
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SE087_RS01900 (SE087_01900) - 403369..405210 (-) 1842 WP_217176203.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  SE087_RS01905 (SE087_01905) metC 405179..406339 (-) 1161 WP_217176204.1 cystathionine beta-lyase MetC -
  SE087_RS01910 (SE087_01910) - 406336..407439 (-) 1104 WP_000655692.1 PLP-dependent transferase -
  SE087_RS01915 (SE087_01915) spo0J 408103..408948 (+) 846 WP_319090874.1 ParB/RepB/Spo0J family partition protein Regulator
  SE087_RS01920 (SE087_01920) - 409102..409983 (+) 882 WP_000373075.1 mechanosensitive ion channel family protein -
  SE087_RS01925 (SE087_01925) - 410013..410216 (+) 204 WP_000157348.1 DUF951 domain-containing protein -
  SE087_RS01930 (SE087_01930) ychF 410228..411325 (+) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  SE087_RS01935 (SE087_01935) - 411410..411601 (-) 192 WP_001052483.1 hypothetical protein -
  SE087_RS01940 (SE087_01940) rpsF 411845..412141 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  SE087_RS01945 (SE087_01945) ssbA 412162..412665 (+) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  SE087_RS01950 (SE087_01950) rpsR 412717..412959 (+) 243 WP_000897044.1 30S ribosomal protein S18 -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32822.91 Da        Isoelectric Point: 10.0650

>NTDB_id=824906 SE087_RS01915 WP_319090874.1 408103..408948(+) (spo0J) [Staphylococcus aureus strain 17CS1042]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKNLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDILIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=824906 SE087_RS01915 WP_319090874.1 408103..408948(+) (spo0J) [Staphylococcus aureus strain 17CS1042]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTTAGAAAAACAGTACAAGGCTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAAATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAATCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATTGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCACAAGATGA
CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(161-210)

ParB/Sulfiredoxin domain (ParB_N)

(22-109)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.996

92.883

0.381