Detailed information
Bioinformatically predicted
Overview
| Name | pilL | Type | Machinery gene |
| Locus tag | SE146_RS02365 | Genome accession | NZ_CP138339 |
| Coordinates | 451723..452196 (+) | Length | 157 a.a. |
| NCBI ID | WP_012503482.1 | Uniprot ID | B4RKG7 |
| Organism | Neisseria gonorrhoeae strain TH2288 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 446723..457196
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SE146_RS02340 (SE146_02330) | dnaB | 447336..448742 (+) | 1407 | WP_123771571.1 | replicative DNA helicase | - |
| SE146_RS02345 (SE146_02335) | pilH | 448897..449562 (+) | 666 | WP_319078477.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| SE146_RS02350 (SE146_02340) | pilV | 449594..450205 (+) | 612 | WP_250328389.1 | type IV pilus modification protein PilV | Regulator |
| SE146_RS02355 (SE146_02345) | pilJ | 450202..451131 (+) | 930 | WP_250328390.1 | PilW family protein | Machinery gene |
| SE146_RS02360 (SE146_02350) | pilK | 451110..451721 (+) | 612 | WP_123768185.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| SE146_RS02365 (SE146_02355) | pilL | 451723..452196 (+) | 474 | WP_012503482.1 | PilX family type IV pilin | Machinery gene |
| SE146_RS02370 (SE146_02360) | - | 452266..452574 (-) | 309 | WP_025456241.1 | AzlD family protein | - |
| SE146_RS02375 (SE146_02365) | - | 452571..453280 (-) | 710 | Protein_461 | AzlC family ABC transporter permease | - |
| SE146_RS02380 (SE146_02370) | dut | 453446..453898 (+) | 453 | WP_003687923.1 | dUTP diphosphatase | - |
| SE146_RS02385 (SE146_02375) | dapC | 453976..455163 (+) | 1188 | WP_123771553.1 | succinyldiaminopimelate transaminase | - |
| SE146_RS02390 (SE146_02380) | yaaA | 455319..456098 (+) | 780 | WP_047917077.1 | peroxide stress protein YaaA | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 17486.30 Da Isoelectric Point: 9.9561
>NTDB_id=824779 SE146_RS02365 WP_012503482.1 451723..452196(+) (pilL) [Neisseria gonorrhoeae strain TH2288]
MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTEMVGINNVLKQFILKNPQDNNQIIKSKLETFVLGYKM
NPKIAKKYSVSVAFANTEKPRAYRLVGVPKAGTGYTLSVWMNSVGDGYKCRNATSAQTYSETLSANTGCEAFSNRKK
MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTEMVGINNVLKQFILKNPQDNNQIIKSKLETFVLGYKM
NPKIAKKYSVSVAFANTEKPRAYRLVGVPKAGTGYTLSVWMNSVGDGYKCRNATSAQTYSETLSANTGCEAFSNRKK
Nucleotide
Download Length: 474 bp
>NTDB_id=824779 SE146_RS02365 WP_012503482.1 451723..452196(+) (pilL) [Neisseria gonorrhoeae strain TH2288]
ATGGAACAAAAAGGGTTTACATTGATTGAGATGATGATAGTTGTCGCGATACTCGGCATTATCAGCGTCATTGCCATACC
TTCTTATCAAAGTTATATTGAAAAAGGCTATCAGTCCCAGCTTTATACGGAGATGGTCGGTATCAACAATGTTCTCAAAC
AGTTTATTTTGAAAAATCCCCAGGACAATAATCAGATCATCAAGAGCAAACTGGAAACATTTGTCTTAGGCTATAAGATG
AATCCGAAAATTGCCAAAAAATATAGTGTTTCGGTGGCATTTGCCAATACGGAAAAACCAAGGGCATACAGGTTGGTCGG
CGTTCCGAAGGCAGGGACGGGTTATACCTTGTCGGTATGGATGAACAGCGTGGGCGACGGATACAAATGCCGTAATGCCA
CTTCTGCCCAGACCTATTCGGAGACCTTGTCCGCAAATACCGGCTGTGAAGCTTTCTCTAATCGTAAAAAATAG
ATGGAACAAAAAGGGTTTACATTGATTGAGATGATGATAGTTGTCGCGATACTCGGCATTATCAGCGTCATTGCCATACC
TTCTTATCAAAGTTATATTGAAAAAGGCTATCAGTCCCAGCTTTATACGGAGATGGTCGGTATCAACAATGTTCTCAAAC
AGTTTATTTTGAAAAATCCCCAGGACAATAATCAGATCATCAAGAGCAAACTGGAAACATTTGTCTTAGGCTATAAGATG
AATCCGAAAATTGCCAAAAAATATAGTGTTTCGGTGGCATTTGCCAATACGGAAAAACCAAGGGCATACAGGTTGGTCGG
CGTTCCGAAGGCAGGGACGGGTTATACCTTGTCGGTATGGATGAACAGCGTGGGCGACGGATACAAATGCCGTAATGCCA
CTTCTGCCCAGACCTATTCGGAGACCTTGTCCGCAAATACCGGCTGTGAAGCTTTCTCTAATCGTAAAAAATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilL | Neisseria gonorrhoeae MS11 |
91.72 |
100 |
0.917 |
| pilX | Neisseria meningitidis 8013 |
85.35 |
100 |
0.854 |