Detailed information NTG0824637

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: SD207_RS15015
• Genome accession: NZ_CP138324
• Coordinates: 3183160..3184473 (-)
• Length: 437 a.a.
• NCBI ID: WP_001289250.1
• Uniprot ID: A3M1Y8
• Organism: Acinetobacter baumannii strain JBAB
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3178160..3189473

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SD207_RS15000 (SD207_15000)	-	3180049..3181575 (+)	1527	WP_000207467.1	fumarate hydratase	-
SD207_RS15005 (SD207_15005)	-	3181717..3182271 (+)	555	WP_000155519.1	DUF2059 domain-containing protein	-
SD207_RS15010 (SD207_15010)	-	3182296..3183012 (-)	717	WP_279727228.1	DUF2846 domain-containing protein	-
SD207_RS15015 (SD207_15015)	clpX	3183160..3184473 (-)	1314	WP_001289250.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
SD207_RS15020 (SD207_15020)	clpP	3184575..3185180 (-)	606	WP_000289452.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	-
SD207_RS15025 (SD207_15025)	tig	3185373..3186707 (-)	1335	WP_001198432.1	trigger factor	-
SD207_RS15030 (SD207_15030)	-	3187122..3189410 (+)	2289	WP_002013915.1	TonB-dependent siderophore receptor	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 48082.87 Da
• Isoelectric Point: 4.9985

>NTDB_id=824637 SD207_RS15015 WP_001289250.1 3183160..3184473(-) (clpX) [Acinetobacter baumannii strain JBAB]
MSEHPQGQKHCSFCGKTQSEVGKLIAGEDAYICNECVDVCLDLVQTSQQVEAGDWASKALPKPHEIRAALDQYVIGQDLA
KKTLSVAVYNHYKRLKVGQSGHVSKDVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENI
VQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGGRKHPQQEFIQIDTS
NILFICGGAFAGLEKIVQQRQEKGGIGFTADVKNKDETKKLAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEAL
MQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDLPSRTDVGTVFINEAV
INGEAEPVYKSERQPKEAVTHESVAKADLKVIDSKSA

Nucleotide

• Length: 1314 bp

>NTDB_id=824637 SD207_RS15015 WP_001289250.1 3183160..3184473(-) (clpX) [Acinetobacter baumannii strain JBAB]
ATGTCCGAACATCCTCAAGGACAAAAACATTGTTCATTTTGCGGTAAAACGCAGTCTGAAGTCGGGAAACTGATTGCGGG
CGAGGACGCATATATTTGTAATGAGTGTGTAGATGTCTGCTTAGACCTTGTACAAACCAGCCAACAGGTTGAAGCAGGTG
ACTGGGCAAGCAAGGCATTGCCAAAACCACATGAAATACGTGCTGCGCTTGATCAATATGTGATTGGTCAGGATCTTGCC
AAAAAGACATTATCTGTTGCCGTTTATAACCATTATAAGCGTTTAAAAGTCGGGCAATCTGGTCATGTGTCTAAAGATGT
GGAAATTGCTAAAAGTAACATTCTACTGATTGGGCCTACCGGTTCAGGTAAAACATTACTTGCTCAAACATTGGCTCGTT
TATTAGATGTGCCGTTTGCAATGGCAGATGCGACTACTTTGACGGAAGCGGGTTATGTTGGCGAAGACGTTGAAAATATC
GTACAAAAACTTTTGCAAAAAGCAGATTACGATGTAGAAAAAGCTCAAAAGGGTATTATCTACATTGATGAAATCGACAA
AATTACACGTAAATCTGAAAATCCGTCGATTACTCGTGACGTGTCTGGTGAAGGTGTACAACAAGCTTTGCTTAAGATGA
TTGAAGGTACTGTAGCCTCAATTCCACCACAAGGTGGACGTAAGCATCCACAGCAAGAGTTCATTCAAATTGATACCTCA
AATATCCTATTTATTTGTGGTGGTGCATTTGCTGGACTGGAAAAAATTGTACAACAGCGTCAAGAGAAAGGCGGAATTGG
CTTTACGGCTGATGTTAAAAACAAAGATGAAACCAAAAAACTTGCTGAATTATTCCGTCAAGTTGAGCCAACTGATTTAG
TTAAATTTGGTTTAATTCCAGAATTCATTGGCCGTTTACCAGTGATTGCAACGCTTGAAGAGCTTGATGAAGAAGCGTTA
ATGCAAATTTTGACTGAACCGAAAAATGCATTAACTCGTCAGTATCAATACCTGTTCAATATGGAAAATGTTGACCTCGT
ATTTGAAGATTCAGCTTTACGTGCAGTGGCTAAGCGTGCGCTTGAGCGTAATACCGGAGCTCGTGGCCTACGTTCGATTT
TGGAAAATGTTCTACTTGAAACGATGTATGACTTGCCAAGCCGTACAGATGTAGGAACAGTTTTCATTAATGAAGCAGTT
ATTAATGGTGAAGCTGAGCCTGTCTACAAGTCAGAACGTCAGCCTAAAGAAGCAGTAACACATGAAAGTGTTGCCAAGGC
AGATTTAAAAGTAATTGATTCGAAGTCTGCTTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (315-390)

• ClpX C4-type zinc finger (zf-C4_ClpX) (9-45)

• AAA domain (Cdc48 subfamily) (AAA_2) (111-309)

3D structure

• AlphaFold DB: A3M1Y8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	59.453	91.991	0.547
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.426	92.449	0.531