Detailed information NTG0082378

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: R8586_RS11305
• Genome accession: NZ_AP026922
• Coordinates: 2152896..2153993 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266660.1
• Uniprot ID: Q97N44
• Organism: Streptococcus pneumoniae strain PZ900700038
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2147896..2158993

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8586_RS11280 (PC0038_22040)	pgsA	2148417..2148962 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
R8586_RS11285 (PC0038_22050)	rodZ	2148973..2149794 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
R8586_RS11290 (PC0038_22060)	yfmH	2149836..2151119 (-)	1284	WP_000170222.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
R8586_RS11295 (PC0038_22070)	yfmF	2151116..2152366 (-)	1251	WP_000424278.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
R8586_RS11300 (PC0038_22080)	yaaA	2152525..2152893 (+)	369	WP_000455900.1	S4 domain-containing protein YaaA	-
R8586_RS11305 (PC0038_22090)	recF	2152896..2153993 (+)	1098	WP_000266660.1	DNA replication/repair protein RecF	Machinery gene
R8586_RS11310 (PC0038_22100)	guaB	2154044..2155522 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
R8586_RS11315 (PC0038_22110)	trpS	2155675..2156700 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
R8586_RS11320 (PC0038_22120)	-	2156906..2158528 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41900.00 Da
• Isoelectric Point: 9.0596

>NTDB_id=82378 R8586_RS11305 WP_000266660.1 2152896..2153993(+) (recF) [Streptococcus pneumoniae strain PZ900700038]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=82378 R8586_RS11305 WP_000266660.1 2152896..2153993(+) (recF) [Streptococcus pneumoniae strain PZ900700038]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCTATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q97N44

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.726	100	0.997
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46