Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   QHF92_RS06445 Genome accession   NZ_CP123994
Coordinates   1337934..1338590 (+) Length   218 a.a.
NCBI ID   WP_060398378.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain M3     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1332934..1343590
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QHF92_RS06415 (QHF92_06415) oppF 1333388..1334305 (+) 918 WP_003239287.1 oligopeptide ABC transporter ATP-binding protein OppF -
  QHF92_RS06420 (QHF92_06420) - 1334412..1335629 (+) 1218 WP_080428989.1 MFS transporter -
  QHF92_RS06425 (QHF92_06425) - 1335804..1336382 (+) 579 WP_003239283.1 GNAT family N-acetyltransferase -
  QHF92_RS06430 (QHF92_06430) spx 1336563..1336958 (+) 396 WP_003239281.1 transcriptional regulator Spx -
  QHF92_RS06435 (QHF92_06435) - 1337001..1337657 (-) 657 WP_019258060.1 TerC family protein -
  QHF92_RS06440 (QHF92_06440) - 1337842..1337967 (+) 126 WP_119913679.1 hypothetical protein -
  QHF92_RS06445 (QHF92_06445) mecA 1337934..1338590 (+) 657 WP_060398378.1 adaptor protein MecA Regulator
  QHF92_RS06450 (QHF92_06450) coiA 1338751..1339902 (+) 1152 WP_060398379.1 competence protein CoiA family protein Machinery gene
  QHF92_RS06455 (QHF92_06455) pepF 1340132..1341961 (+) 1830 WP_166638382.1 oligoendopeptidase F -
  QHF92_RS06460 (QHF92_06460) - 1342000..1342167 (-) 168 WP_032732134.1 hypothetical protein -
  QHF92_RS06465 (QHF92_06465) spxH 1342481..1343380 (-) 900 WP_060398380.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25758.65 Da        Isoelectric Point: 4.1174

>NTDB_id=823711 QHF92_RS06445 WP_060398378.1 1337934..1338590(+) (mecA) [Bacillus inaquosorum strain M3]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSKLNVNGSKTTLYSFENR
YYLYVDFCNITDEEVENQLSILLEYANESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=823711 QHF92_RS06445 WP_060398378.1 1337934..1338590(+) (mecA) [Bacillus inaquosorum strain M3]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTTCATGAGGAAGAGGAAT
TCGCTGTGGAAGGCCCTCTTTGGATCCAAGTTCAGGCTCTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGGTTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAAATTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCAAA
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

99.083

100

0.991