Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QHF92_RS02165 Genome accession   NZ_CP123994
Coordinates   426353..427303 (+) Length   316 a.a.
NCBI ID   WP_003240192.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain M3     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 421353..432303
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QHF92_RS02140 (QHF92_02140) - 421417..422838 (+) 1422 WP_080428959.1 HAMP domain-containing sensor histidine kinase -
  QHF92_RS02145 (QHF92_02145) rapC 422996..424144 (+) 1149 WP_019257465.1 response regulator aspartate phosphatase RapC Regulator
  QHF92_RS02150 (QHF92_02150) phrC 424128..424250 (+) 123 WP_003240188.1 phosphatase RapC inhibitor PhrC Regulator
  QHF92_RS02155 (QHF92_02155) - 424346..424453 (-) 108 WP_019257466.1 YjcZ family sporulation protein -
  QHF92_RS02160 (QHF92_02160) - 424604..425968 (-) 1365 WP_060397922.1 aspartate kinase -
  QHF92_RS02165 (QHF92_02165) ceuB 426353..427303 (+) 951 WP_003240192.1 petrobactin ABC transporter permease YclN Machinery gene
  QHF92_RS02170 (QHF92_02170) yclO 427296..428243 (+) 948 WP_060397923.1 petrobactin ABC transporter permease YclO -
  QHF92_RS02175 (QHF92_02175) yclP 428237..428995 (+) 759 WP_003240196.1 petrobactin ABC transporter ATP-binding protein YclP -
  QHF92_RS02180 (QHF92_02180) - 429017..429970 (+) 954 WP_060397924.1 siderophore ABC transporter substrate-binding protein -
  QHF92_RS02185 (QHF92_02185) - 430016..431434 (-) 1419 WP_003240201.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34848.21 Da        Isoelectric Point: 9.8375

>NTDB_id=823697 QHF92_RS02165 WP_003240192.1 426353..427303(+) (ceuB) [Bacillus inaquosorum strain M3]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSNQEASTLFASRLPRLISIIIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLMKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGSIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYIYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLVTSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=823697 QHF92_RS02165 WP_003240192.1 426353..427303(+) (ceuB) [Bacillus inaquosorum strain M3]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGCGTGGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAACCAAGAGGCGTCAACGCTGTTTGCTAGCCGTTTGCCGCGATTGATCAGCATTATCA
TCGCTGGCTTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCCTGCTGCTGTTTACATCCGCCAGTCCTTTAATGAAAATGCT
GGTTGCATTTGTCTTTGCCCTTGCAGGAAATTTCTTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACGATCT
TTATTCCGCTTGTCGGGTTAATGCTCGGGAGTATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTTCAAGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATATTTATGCGGATAAATTCACAGTGGCCGGTATGGGAGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGGTCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTCAAGAGCAGCCTGCCGCATAC
TGCGCTATTGGGAGCGGTTTTTGTGCTGTTTTGCGATATATTGGGCAGAATCATTATCTTCCCTTACGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCATATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522