Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | QHG39_RS04295 | Genome accession | NZ_CP123983 |
| Coordinates | 862342..862740 (+) | Length | 132 a.a. |
| NCBI ID | WP_016931212.1 | Uniprot ID | A0A7Z1SCB7 |
| Organism | Staphylococcus haemolyticus strain SH9361 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 857342..867740
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QHG39_RS04265 (QHG39_04265) | atpD | 857618..859030 (+) | 1413 | WP_011275243.1 | F0F1 ATP synthase subunit beta | - |
| QHG39_RS04270 (QHG39_04270) | - | 859051..859452 (+) | 402 | WP_011275244.1 | F0F1 ATP synthase subunit epsilon | - |
| QHG39_RS04275 (QHG39_04275) | - | 859580..859813 (+) | 234 | WP_016931215.1 | DUF1146 family protein | - |
| QHG39_RS04280 (QHG39_04280) | murA | 859918..861183 (+) | 1266 | WP_016931214.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| QHG39_RS04285 (QHG39_04285) | fabZ | 861223..861660 (+) | 438 | WP_016931213.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| QHG39_RS04290 (QHG39_04290) | - | 861711..862154 (-) | 444 | WP_011275248.1 | YwpF-like family protein | - |
| QHG39_RS04295 (QHG39_04295) | ssb | 862342..862740 (+) | 399 | WP_016931212.1 | single-stranded DNA-binding protein | Machinery gene |
| QHG39_RS04300 (QHG39_04300) | - | 863079..863786 (+) | 708 | WP_011275250.1 | transglycosylase family protein | - |
| QHG39_RS04305 (QHG39_04305) | tenA | 864075..864764 (+) | 690 | WP_011275251.1 | thiaminase II | - |
| QHG39_RS04310 (QHG39_04310) | thiD | 864757..865578 (+) | 822 | WP_016931211.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| QHG39_RS04315 (QHG39_04315) | thiM | 865571..866362 (+) | 792 | WP_016931210.1 | hydroxyethylthiazole kinase | - |
| QHG39_RS04320 (QHG39_04320) | thiE | 866364..867002 (+) | 639 | WP_011275254.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 132 a.a. Molecular weight: 15189.13 Da Isoelectric Point: 4.9684
>NTDB_id=823560 QHG39_RS04295 WP_016931212.1 862342..862740(+) (ssb) [Staphylococcus haemolyticus strain SH9361]
MLNKIVIVGRLTKKAQIFENEEVKIATFCVATERNYKDENNEIACDYIFCKAFGKTATNIESYTDQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSKNYNILPNTSYDEDAYSFDHLEVIDVN
MLNKIVIVGRLTKKAQIFENEEVKIATFCVATERNYKDENNEIACDYIFCKAFGKTATNIESYTDQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSKNYNILPNTSYDEDAYSFDHLEVIDVN
Nucleotide
Download Length: 399 bp
>NTDB_id=823560 QHG39_RS04295 WP_016931212.1 862342..862740(+) (ssb) [Staphylococcus haemolyticus strain SH9361]
ATGCTAAATAAAATTGTGATAGTAGGTCGATTGACCAAAAAGGCACAAATATTTGAAAACGAGGAGGTGAAAATAGCTAC
GTTCTGTGTTGCAACTGAACGTAATTATAAAGATGAAAATAATGAAATAGCTTGTGATTATATTTTTTGTAAGGCATTTG
GTAAAACAGCAACAAATATAGAATCATATACAGACCAAGGCACTTTAGTTGGTATTACAGGACAAATGAGATCTCGTAAG
TACGATAAAGATGGCCAAACGCACTTTGTGACTGAATTATATGTTGAAACAATTAAATTTATGTCCCCTAAATCTAAAAA
TTATAATATTCTTCCTAACACCTCATATGATGAAGACGCTTATTCCTTTGATCACCTTGAAGTGATTGATGTTAACTAA
ATGCTAAATAAAATTGTGATAGTAGGTCGATTGACCAAAAAGGCACAAATATTTGAAAACGAGGAGGTGAAAATAGCTAC
GTTCTGTGTTGCAACTGAACGTAATTATAAAGATGAAAATAATGAAATAGCTTGTGATTATATTTTTTGTAAGGCATTTG
GTAAAACAGCAACAAATATAGAATCATATACAGACCAAGGCACTTTAGTTGGTATTACAGGACAAATGAGATCTCGTAAG
TACGATAAAGATGGCCAAACGCACTTTGTGACTGAATTATATGTTGAAACAATTAAATTTATGTCCCCTAAATCTAAAAA
TTATAATATTCTTCCTAACACCTCATATGATGAAGACGCTTATTCCTTTGATCACCTTGAAGTGATTGATGTTAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
75.573 |
99.242 |
0.75 |
| ssb | Staphylococcus aureus MW2 |
74.809 |
99.242 |
0.742 |