Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | QHG38_RS04610 | Genome accession | NZ_CP123979 |
| Coordinates | 940380..940778 (+) | Length | 132 a.a. |
| NCBI ID | WP_016931212.1 | Uniprot ID | A0A7Z1SCB7 |
| Organism | Staphylococcus haemolyticus strain SH1275 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 935380..945778
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QHG38_RS04580 (QHG38_04580) | atpD | 935656..937068 (+) | 1413 | WP_011275243.1 | F0F1 ATP synthase subunit beta | - |
| QHG38_RS04585 (QHG38_04585) | - | 937089..937490 (+) | 402 | WP_011275244.1 | F0F1 ATP synthase subunit epsilon | - |
| QHG38_RS04590 (QHG38_04590) | - | 937618..937851 (+) | 234 | WP_016931215.1 | DUF1146 family protein | - |
| QHG38_RS04595 (QHG38_04595) | murA | 937956..939221 (+) | 1266 | WP_016931214.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| QHG38_RS04600 (QHG38_04600) | fabZ | 939261..939698 (+) | 438 | WP_016931213.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| QHG38_RS04605 (QHG38_04605) | - | 939749..940192 (-) | 444 | WP_011275248.1 | YwpF-like family protein | - |
| QHG38_RS04610 (QHG38_04610) | ssb | 940380..940778 (+) | 399 | WP_016931212.1 | single-stranded DNA-binding protein | Machinery gene |
| QHG38_RS04615 (QHG38_04615) | - | 941117..941824 (+) | 708 | WP_011275250.1 | transglycosylase family protein | - |
| QHG38_RS04620 (QHG38_04620) | tenA | 942113..942802 (+) | 690 | WP_011275251.1 | thiaminase II | - |
| QHG38_RS04625 (QHG38_04625) | thiD | 942795..943616 (+) | 822 | WP_240557206.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| QHG38_RS04630 (QHG38_04630) | thiM | 943609..944400 (+) | 792 | WP_016931210.1 | hydroxyethylthiazole kinase | - |
| QHG38_RS04635 (QHG38_04635) | thiE | 944402..945040 (+) | 639 | WP_011275254.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 132 a.a. Molecular weight: 15189.13 Da Isoelectric Point: 4.9684
>NTDB_id=823527 QHG38_RS04610 WP_016931212.1 940380..940778(+) (ssb) [Staphylococcus haemolyticus strain SH1275]
MLNKIVIVGRLTKKAQIFENEEVKIATFCVATERNYKDENNEIACDYIFCKAFGKTATNIESYTDQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSKNYNILPNTSYDEDAYSFDHLEVIDVN
MLNKIVIVGRLTKKAQIFENEEVKIATFCVATERNYKDENNEIACDYIFCKAFGKTATNIESYTDQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSKNYNILPNTSYDEDAYSFDHLEVIDVN
Nucleotide
Download Length: 399 bp
>NTDB_id=823527 QHG38_RS04610 WP_016931212.1 940380..940778(+) (ssb) [Staphylococcus haemolyticus strain SH1275]
ATGCTAAATAAAATTGTGATAGTAGGTCGATTGACCAAAAAGGCACAAATATTTGAAAACGAGGAGGTGAAAATAGCTAC
GTTCTGTGTTGCAACTGAACGTAATTATAAAGATGAAAATAATGAAATAGCTTGTGATTATATTTTTTGTAAGGCATTTG
GTAAAACAGCAACAAATATAGAATCATATACAGACCAAGGCACTTTAGTTGGTATTACAGGACAAATGAGATCTCGTAAG
TACGATAAAGATGGCCAAACGCACTTTGTGACTGAATTATATGTTGAAACAATTAAATTTATGTCCCCTAAATCTAAAAA
TTATAATATTCTTCCTAACACCTCATATGATGAAGACGCTTATTCCTTTGATCACCTTGAAGTGATTGATGTTAACTAA
ATGCTAAATAAAATTGTGATAGTAGGTCGATTGACCAAAAAGGCACAAATATTTGAAAACGAGGAGGTGAAAATAGCTAC
GTTCTGTGTTGCAACTGAACGTAATTATAAAGATGAAAATAATGAAATAGCTTGTGATTATATTTTTTGTAAGGCATTTG
GTAAAACAGCAACAAATATAGAATCATATACAGACCAAGGCACTTTAGTTGGTATTACAGGACAAATGAGATCTCGTAAG
TACGATAAAGATGGCCAAACGCACTTTGTGACTGAATTATATGTTGAAACAATTAAATTTATGTCCCCTAAATCTAAAAA
TTATAATATTCTTCCTAACACCTCATATGATGAAGACGCTTATTCCTTTGATCACCTTGAAGTGATTGATGTTAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
75.573 |
99.242 |
0.75 |
| ssb | Staphylococcus aureus MW2 |
74.809 |
99.242 |
0.742 |