Detailed information NTG0823088

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: QHG52_RS19490
• Genome accession: NZ_CP123912
• Coordinates: 4212230..4213645 (+)
• Length: 471 a.a.
• NCBI ID: WP_005035339.1
• Uniprot ID: A0A0A8TL64
• Organism: Acinetobacter bereziniae strain UCO-553
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 4207230..4218645

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QHG52_RS19470	thrC	4207326..4208465 (+)	1140	WP_005035341.1	threonine synthase	-
QHG52_RS19475	pbpG	4208687..4209739 (-)	1053	WP_004826319.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
QHG52_RS19480	-	4209972..4210607 (+)	636	WP_004718392.1	response regulator	-
QHG52_RS19485	pilS	4210644..4212212 (+)	1569	WP_004826317.1	ATP-binding protein	Regulator
QHG52_RS19490	pilR	4212230..4213645 (+)	1416	WP_005035339.1	sigma-54 dependent transcriptional regulator	Regulator
QHG52_RS19495	-	4213744..4214916 (-)	1173	WP_042088582.1	S41 family peptidase	-
QHG52_RS19500	gpmI	4214945..4216492 (-)	1548	WP_005035335.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
QHG52_RS19505	lptG	4216659..4217729 (-)	1071	WP_004826310.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 471 a.a.
• Molecular weight: 53063.08 Da
• Isoelectric Point: 6.7083

>NTDB_id=823088 QHG52_RS19490 WP_005035339.1 4212230..4213645(+) (pilR) [Acinetobacter bereziniae strain UCO-553]
MTTRQPLVLLVDDEQDLCMLMQMSLSRMGIKTHMAHHLQQAKYFFSEYKYDACITDLNLPDGSGLDLVKHVSQHYPKTPI
AVLTAYGNMEIAIASLKAGAFDFVSKPINQLHLQQLLQKALHVPQLSETVTKAPLEESMLIGDSQIIRKLRESIKKIARS
QAPVFITGESGTGKEVVANLIHLLSNRSDSPFIAINCGAISEELMESELFGHKKGCFSGATQDKQGLVQAANGGTLFLDE
VAELSLAMQAKLLRAVQEKKIRPLGSDTEIEVDFRIISATHQNIEALVEQGKFRHDLFFRIHVMDITLPPLRDRERDILI
LANHFIQQICTEWRIPSKSFTDAAKAFLLQQHYSGNVRELRNIIEKAITMCDEDSIDIQQLQPAPQRSSINKIESFESVP
TNHTAIELPNKAPNIPKEGLEQYLENVEKEVLLSALNQTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTDDE

Nucleotide

• Length: 1416 bp

>NTDB_id=823088 QHG52_RS19490 WP_005035339.1 4212230..4213645(+) (pilR) [Acinetobacter bereziniae strain UCO-553]
ATGACTACACGACAACCATTGGTGTTACTTGTAGATGATGAACAAGATTTATGTATGTTGATGCAAATGAGCCTATCGCG
AATGGGTATCAAAACACATATGGCACATCATTTACAGCAAGCCAAATATTTTTTTAGTGAATATAAATATGATGCCTGTA
TTACAGATTTAAACTTGCCTGATGGGAGTGGTTTAGATTTAGTCAAACATGTATCGCAACATTATCCTAAAACGCCAATC
GCTGTACTCACAGCATATGGCAATATGGAAATCGCAATTGCATCACTTAAAGCTGGGGCTTTTGATTTCGTTAGCAAACC
AATCAATCAACTACATTTACAGCAACTTTTACAAAAAGCTTTACATGTTCCTCAGTTGAGTGAAACTGTAACTAAAGCCC
CACTTGAAGAGTCCATGCTCATTGGCGACTCGCAAATCATTCGTAAATTAAGAGAATCGATTAAAAAAATTGCCCGTTCA
CAAGCACCTGTTTTTATTACAGGGGAGTCTGGTACAGGGAAAGAAGTGGTTGCGAATCTTATTCATTTACTCAGTAACCG
CAGTGATAGTCCATTTATTGCAATCAACTGCGGGGCTATCTCTGAAGAACTGATGGAAAGTGAGCTTTTCGGACATAAGA
AAGGCTGTTTCTCTGGCGCAACGCAAGATAAACAAGGCTTGGTTCAGGCTGCCAATGGTGGCACATTGTTCTTGGATGAA
GTCGCAGAATTGTCTTTAGCCATGCAAGCTAAACTTTTACGTGCTGTTCAGGAAAAGAAAATCCGTCCTTTGGGTAGCGA
TACTGAAATAGAAGTTGACTTTCGAATCATCAGTGCAACGCATCAAAATATCGAAGCTCTGGTTGAACAAGGGAAGTTCC
GCCATGACTTGTTTTTTAGAATCCATGTCATGGATATTACACTCCCGCCATTACGTGATCGCGAACGTGACATCTTGATT
TTAGCCAATCATTTTATTCAACAAATTTGTACTGAATGGCGAATTCCGAGCAAATCATTCACAGATGCAGCAAAAGCATT
TCTTTTACAGCAACATTATTCTGGTAATGTTCGTGAACTGCGCAATATTATTGAAAAAGCCATCACGATGTGTGATGAGG
ATTCTATCGATATTCAACAACTCCAACCTGCGCCACAACGGAGCAGTATTAACAAAATTGAATCCTTTGAGTCTGTTCCG
ACCAACCATACGGCGATTGAACTTCCAAACAAAGCACCGAATATTCCGAAAGAAGGCTTGGAGCAATATTTGGAAAATGT
TGAAAAAGAAGTCTTGTTATCTGCATTAAATCAAACCCATTGGAATCGGACCTTAGCTGCGAAAAAACTCGGCATGACCT
TTCGATCTTTACGTTATCGTTTGAAAAAGTTTGGTCTAGATACTGATGATGAATAG

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-117)

• Bacterial regulatory protein, Fis family (HTH_8) (424-464)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

3D structure

• AlphaFold DB: A0A0A8TL64

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	69.915	100	0.701
pilR	Pseudomonas aeruginosa PAK	47.186	98.089	0.463