Detailed information NTG0822996

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: QC632_RS02900
• Genome accession: NZ_CP123897
• Coordinates: 655043..656383 (+)
• Length: 446 a.a.
• NCBI ID: WP_281022179.1
• Uniprot ID: -
• Organism: Methylomonas sp. UP202
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 650043..661383

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QC632_RS02885 (QC632_02885)	sucD	651252..652124 (-)	873	WP_064031616.1	succinate--CoA ligase subunit alpha	-
QC632_RS02890 (QC632_02890)	sucC	652124..653293 (-)	1170	WP_281022177.1	ADP-forming succinate--CoA ligase subunit beta	-
QC632_RS02895 (QC632_02895)	-	653421..655046 (+)	1626	WP_281022178.1	ATP-binding protein	-
QC632_RS02900 (QC632_02900)	pilR	655043..656383 (+)	1341	WP_281022179.1	sigma-54 dependent transcriptional regulator	Regulator
QC632_RS02905 (QC632_02905)	-	656422..656886 (-)	465	WP_064031612.1	hypothetical protein	-
QC632_RS02910 (QC632_02910)	-	657020..658855 (-)	1836	WP_064031611.1	EAL domain-containing protein	-
QC632_RS02915 (QC632_02915)	-	659038..659883 (+)	846	WP_281022180.1	HDOD domain-containing protein	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 49088.74 Da
• Isoelectric Point: 6.5107

>NTDB_id=822996 QC632_RS02900 WP_281022179.1 655043..656383(+) (pilR) [Methylomonas sp. UP202]
MSPPVTLVVDDEPDIRELLEITLNRMDIQTRCAADLAGAKQLLASQRFDLCLTDMKLPDGDGLELVDHIQACGLPLPVAV
ITAHGNMDIAIKAMKKGAFDFLSKPVDLAVLRQLVNHALQASQGRAAEKERRTRDVLLGDSVPMRAIRSKIEKVARNQAP
VYISGESGSGKELVARLIHQQSPRGAQPFVAINCGAIPLELMESEFFGHKKGSFTGAISDKQGLFQAAEGGTLFLDEVAD
LPLPLQVKLLRAIQEKKVRPVGEQREVPVDVRLLSATHKDLAKMVQEGAFRQDLYYRINVIELNLPPLRAREADIPQLTR
HLLTKLAAANGLAIPDLSDAAWRALKGYCFPGNVRELENILERALALHEGNLIDVDDLNLPLGLEAAAAEDFDAQKMSLE
SYLEGIEKKALSSALEENRWNKTATAKQLGLTFRSLRYRLKKLGLE

Nucleotide

• Length: 1341 bp

>NTDB_id=822996 QC632_RS02900 WP_281022179.1 655043..656383(+) (pilR) [Methylomonas sp. UP202]
ATGAGCCCACCCGTCACGCTGGTTGTCGACGACGAGCCCGACATTCGGGAATTGCTGGAAATCACGTTGAACCGAATGGA
CATTCAAACCCGCTGCGCGGCCGATTTGGCCGGCGCCAAGCAATTGCTGGCCAGCCAACGTTTCGACTTATGTTTGACCG
ATATGAAATTGCCGGACGGCGACGGTTTGGAACTGGTTGACCACATCCAGGCGTGCGGTCTGCCATTGCCGGTGGCGGTG
ATTACCGCGCACGGCAATATGGATATCGCCATCAAGGCCATGAAAAAAGGCGCTTTCGACTTCCTGTCCAAGCCGGTCGA
TTTGGCGGTATTGCGGCAGTTGGTCAACCATGCGTTGCAAGCCTCGCAAGGGAGGGCGGCCGAAAAGGAACGCCGCACCC
GCGATGTCTTGCTGGGCGATTCGGTGCCGATGCGGGCGATCCGCTCGAAAATCGAGAAGGTGGCGCGCAATCAGGCGCCG
GTTTATATCAGTGGCGAGTCCGGCTCCGGCAAGGAATTGGTGGCGCGGTTGATTCATCAGCAAAGCCCGCGCGGCGCGCA
ACCCTTTGTCGCGATCAATTGCGGCGCGATTCCGCTCGAGTTAATGGAAAGCGAGTTCTTCGGTCATAAAAAAGGCAGCT
TTACCGGCGCGATCAGCGACAAGCAAGGTTTGTTTCAGGCTGCCGAAGGCGGCACGTTGTTTCTCGACGAAGTCGCCGAT
TTGCCGTTACCGTTGCAAGTCAAATTGTTGCGAGCCATCCAGGAAAAGAAAGTCCGGCCGGTCGGCGAGCAGCGCGAAGT
CCCGGTTGACGTGCGCTTATTGAGCGCCACGCACAAGGACTTGGCGAAGATGGTCCAGGAAGGGGCGTTTCGGCAGGATT
TGTATTACCGGATCAATGTCATCGAACTGAATTTGCCGCCGCTGCGGGCCAGGGAAGCCGATATTCCGCAATTGACCCGG
CATTTGTTGACCAAATTGGCCGCCGCCAACGGCCTGGCAATTCCCGATCTGAGCGATGCCGCCTGGCGAGCGCTAAAGGG
GTACTGCTTTCCCGGCAATGTGCGGGAATTGGAAAACATTCTCGAGCGAGCGTTGGCCTTGCACGAGGGCAATCTGATCG
ATGTTGACGATTTGAATTTGCCGTTGGGGCTGGAGGCTGCCGCGGCCGAGGATTTCGACGCGCAAAAGATGTCGCTCGAA
AGCTATTTGGAGGGCATCGAAAAGAAAGCGCTGAGCAGTGCGTTGGAAGAAAATCGTTGGAATAAAACCGCGACCGCCAA
GCAACTGGGCTTGACCTTCCGCTCGTTGCGGTATCGGCTGAAAAAGCTGGGACTGGAGTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (403-443)

• Sigma-54 interaction domain (Sigma54_activat) (138-303)

• Response regulator receiver domain (Response_reg) (7-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	63.556	100	0.641
pilR	Acinetobacter baumannii strain A118	50.649	100	0.525