Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   NRK31_RS10400 Genome accession   NZ_CP123852
Coordinates   2123816..2124703 (+) Length   295 a.a.
NCBI ID   WP_042727677.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 5812R     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2118816..2129703
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NRK31_RS10370 - 2119548..2120309 (+) 762 WP_000323442.1 alpha/beta hydrolase family protein -
  NRK31_RS10375 - 2120554..2121009 (+) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  NRK31_RS10380 - 2121131..2121232 (+) 102 WP_000731972.1 SE2200 family small protein -
  NRK31_RS10385 - 2121292..2122716 (-) 1425 WP_000953758.1 alkaline phosphatase -
  NRK31_RS10390 - 2122914..2123114 (+) 201 WP_000604727.1 hypothetical protein -
  NRK31_RS10395 braR 2123140..2123805 (+) 666 WP_042727676.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  NRK31_RS10400 braS 2123816..2124703 (+) 888 WP_042727677.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  NRK31_RS10405 - 2124811..2125566 (+) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  NRK31_RS10410 - 2125563..2127563 (+) 2001 WP_000776734.1 ABC transporter permease -
  NRK31_RS10415 - 2128222..2128335 (+) 114 WP_011447078.1 hypothetical protein -
  NRK31_RS10420 - 2128717..2128977 (+) 261 WP_001791974.1 hypothetical protein -
  NRK31_RS10425 - 2128987..2129484 (+) 498 WP_001065268.1 glutathione peroxidase -
  NRK31_RS10430 - 2129592..2129675 (-) 84 WP_031797553.1 hypothetical protein -

Sequence

Protein


Download         Length: 295 a.a.        Molecular weight: 34046.34 Da        Isoelectric Point: 5.8962

>NTDB_id=822772 NRK31_RS10400 WP_042727677.1 2123816..2124703(+) (braS) [Staphylococcus aureus strain 5812R]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGIILLLLLIFIGIKYLSFVKTISQQQQIENLETALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=822772 NRK31_RS10400 WP_042727677.1 2123816..2124703(+) (braS) [Staphylococcus aureus strain 5812R]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCATTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAACTGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAATAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGCCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACACACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(191-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

99.322

100

0.993