Detailed information NTG0082259

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: R9C51_RS11105
• Genome accession: NZ_AP026921
• Coordinates: 2140372..2141469 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266660.1
• Uniprot ID: Q97N44
• Organism: Streptococcus pneumoniae strain PZ900700027
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2135372..2146469

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R9C51_RS11080 (PC0027_21460)	pgsA	2135893..2136438 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
R9C51_RS11085 (PC0027_21470)	rodZ	2136449..2137270 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
R9C51_RS11090 (PC0027_21480)	yfmH	2137312..2138595 (-)	1284	WP_000170190.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
R9C51_RS11095 (PC0027_21490)	yfmF	2138592..2139842 (-)	1251	WP_000424251.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
R9C51_RS11100 (PC0027_21500)	-	2140001..2140369 (+)	369	WP_000455898.1	RNA-binding S4 domain-containing protein	-
R9C51_RS11105 (PC0027_21510)	recF	2140372..2141469 (+)	1098	WP_000266660.1	DNA replication/repair protein RecF	Machinery gene
R9C51_RS11110 (PC0027_21520)	guaB	2141520..2142998 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
R9C51_RS11115 (PC0027_21530)	trpS	2143150..2144175 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
R9C51_RS11120 (PC0027_21540)	-	2144381..2146003 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41900.00 Da
• Isoelectric Point: 9.0596

>NTDB_id=82259 R9C51_RS11105 WP_000266660.1 2140372..2141469(+) (recF) [Streptococcus pneumoniae strain PZ900700027]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=82259 R9C51_RS11105 WP_000266660.1 2140372..2141469(+) (recF) [Streptococcus pneumoniae strain PZ900700027]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCTATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q97N44

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.726	100	0.997
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46