Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   QFX10_RS08690 Genome accession   NZ_CP123639
Coordinates   1893546..1894826 (+) Length   426 a.a.
NCBI ID   WP_280605841.1    Uniprot ID   -
Organism   Ligilactobacillus faecis strain WILCCON 0062     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1888546..1899826
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QFX10_RS08660 (QFX10_08660) fabI 1888567..1889331 (+) 765 WP_280605835.1 enoyl-ACP reductase FabI -
  QFX10_RS08665 (QFX10_08665) - 1889397..1890269 (-) 873 WP_280605836.1 N-acetylmuramoyl-L-alanine amidase -
  QFX10_RS08670 (QFX10_08670) pyrH 1890468..1891190 (+) 723 WP_280605837.1 UMP kinase -
  QFX10_RS08675 (QFX10_08675) frr 1891197..1891760 (+) 564 WP_280605838.1 ribosome recycling factor -
  QFX10_RS08680 (QFX10_08680) - 1891879..1892652 (+) 774 WP_280605839.1 isoprenyl transferase -
  QFX10_RS08685 (QFX10_08685) - 1892713..1893513 (+) 801 WP_280605840.1 phosphatidate cytidylyltransferase -
  QFX10_RS08690 (QFX10_08690) eeP 1893546..1894826 (+) 1281 WP_280605841.1 RIP metalloprotease RseP Regulator
  QFX10_RS08695 (QFX10_08695) - 1894849..1896555 (+) 1707 WP_280605842.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 426 a.a.        Molecular weight: 46507.55 Da        Isoelectric Point: 9.5097

>NTDB_id=821864 QFX10_RS08690 WP_280605841.1 1893546..1894826(+) (eeP) [Ligilactobacillus faecis strain WILCCON 0062]
MITTIITFIIVFGLLVFVHEFGHYYFAKRSGILVREFAIGMGPKIFSYRKNGTTYTIRILPLGGYVSMAGLEEDTEELQK
GMPVSLILDANGSVSKINTSQKVTLEAGIPVELLDWDLSTPDDLWIEGYENGEEDQVKRFKVAHDALLIGKDGLALQIAP
ADVRFQAASLPARMMTNFAGPMNNFILAIILFALIALLQGGVKQATNTIGQVQENSIAKKAGLKAGDTITAINGEKTSTW
QDVATKIQPAASKELKLTVKRADQTKTVSVTPKTKTVNGQKVGQIGIIAKEKIDRSPLAIVTYGFTQTWFVIKQIGNALV
SMFHGFSLNDLGGPVAMFSLTSQASESGIVSVITLTALLSVNLGILNLLPIPALDGGKLLLNIIEAIRRKPLAPEKEMII
TMIGFAFLMILMFLVTWNDIQRYFLR

Nucleotide


Download         Length: 1281 bp        

>NTDB_id=821864 QFX10_RS08690 WP_280605841.1 1893546..1894826(+) (eeP) [Ligilactobacillus faecis strain WILCCON 0062]
ATGATAACGACAATCATTACGTTTATTATCGTTTTTGGACTGCTAGTTTTTGTTCATGAATTTGGACACTATTACTTTGC
AAAAAGATCGGGGATCTTAGTCCGTGAATTTGCGATCGGAATGGGTCCAAAGATCTTTAGTTACCGTAAAAATGGGACAA
CTTATACGATCCGGATCTTACCTCTAGGTGGTTATGTCAGCATGGCAGGGCTTGAGGAAGACACAGAAGAATTGCAAAAA
GGGATGCCCGTTAGTTTGATCTTAGATGCCAATGGAAGTGTAAGTAAGATCAATACAAGTCAAAAAGTAACTTTAGAGGC
TGGGATCCCTGTTGAATTGCTCGATTGGGATCTAAGTACACCAGATGATCTTTGGATCGAAGGCTATGAAAATGGTGAAG
AAGATCAAGTTAAACGCTTTAAAGTTGCTCATGATGCATTGCTTATTGGTAAAGATGGGTTAGCTTTGCAGATAGCTCCA
GCTGACGTCAGATTTCAAGCTGCTTCTTTGCCTGCTAGAATGATGACAAATTTTGCTGGACCGATGAATAACTTTATTTT
AGCGATCATTTTATTTGCGTTGATCGCTTTATTACAAGGTGGCGTCAAACAAGCAACAAACACGATCGGACAAGTCCAAG
AAAATTCGATCGCTAAAAAAGCTGGCCTCAAAGCGGGTGATACGATCACCGCGATCAATGGCGAAAAAACGTCAACTTGG
CAAGATGTTGCAACAAAGATCCAACCAGCAGCAAGTAAAGAGCTCAAATTGACAGTCAAACGAGCAGATCAGACTAAAAC
AGTTTCTGTTACACCTAAAACTAAAACTGTCAATGGACAAAAGGTCGGACAGATTGGTATAATTGCTAAGGAAAAAATCG
ATCGCTCTCCGTTAGCGATCGTAACCTATGGTTTTACGCAAACTTGGTTTGTTATAAAACAGATCGGAAACGCGCTCGTT
TCAATGTTCCATGGTTTTAGCTTAAATGATCTAGGTGGACCAGTGGCGATGTTTTCTTTGACGTCACAAGCTTCTGAATC
TGGGATCGTGAGTGTGATCACTTTGACGGCTTTGCTTTCTGTCAACTTAGGGATCTTGAATCTTTTACCGATCCCTGCTT
TAGATGGTGGTAAGCTATTATTGAATATCATTGAAGCGATCCGGCGCAAACCGCTGGCGCCAGAAAAAGAAATGATCATC
ACGATGATCGGTTTTGCTTTCTTGATGATCTTGATGTTTTTAGTTACCTGGAACGATATTCAACGCTATTTCCTAAGATA
A

Domains


Predicted by InterproScan.

(7-411)

(209-261)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

47.897

100

0.481

  eeP Streptococcus thermophilus LMD-9

47.664

100

0.479