Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   QE259_RS06460 Genome accession   NZ_CP123609
Coordinates   1056718..1057986 (+) Length   422 a.a.
NCBI ID   WP_320188153.1    Uniprot ID   -
Organism   Enterococcus lactis strain J-2-A     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1051718..1062986
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QE259_RS06435 (QE259_06415) tsf 1052454..1053335 (+) 882 WP_002293878.1 translation elongation factor Ts -
  QE259_RS06440 (QE259_06420) pyrH 1053471..1054193 (+) 723 WP_002293877.1 UMP kinase -
  QE259_RS06445 (QE259_06425) frr 1054196..1054753 (+) 558 WP_002293875.1 ribosome recycling factor -
  QE259_RS06450 (QE259_06430) - 1054948..1055760 (+) 813 WP_002340783.1 isoprenyl transferase -
  QE259_RS06455 (QE259_06435) - 1055757..1056557 (+) 801 WP_002335768.1 phosphatidate cytidylyltransferase -
  QE259_RS06460 (QE259_06440) eeP 1056718..1057986 (+) 1269 WP_320188153.1 RIP metalloprotease RseP Regulator
  QE259_RS06465 (QE259_06445) - 1058054..1059763 (+) 1710 WP_016853221.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46033.47 Da        Isoelectric Point: 4.8405

>NTDB_id=821544 QE259_RS06460 WP_320188153.1 1056718..1057986(+) (eeP) [Enterococcus lactis strain J-2-A]
MKTILTFIIVFGILVIVHEFGHFFFAKRSGILVREFAIGMGPKIYGHQAKDGTTYTLRLLPIGGYVRMAGNGDDETEMAP
GMPLSLLLNSDGIVEKINLSKKIQLTNAIPMELSRYDLEDELTITGYVNGDETEVVTYPVDHDATIIETDGTEIRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFILAIVLFIILAFMQGGVQVTNTNRVGEIIPNGAAAEAGLKENDKVVSVDGKEIHSWN
DLTTVITKNLGKTLDFEIEREGKMQSVDVTPKSVESNGEKVGQLGIQAPMNTGFMDKIIGGTRQAFSGSLEIFKALGSLF
TGFSLDKLGGPVMMYQLSSEAANQGVTTVIGLMALLSMNLGIVNLLPIPALDGGKLVLNIFEGIRGKPLSQEKEGILTLA
GFGFLMLLTVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=821544 QE259_RS06460 WP_320188153.1 1056718..1057986(+) (eeP) [Enterococcus lactis strain J-2-A]
ATGAAAACGATACTAACATTTATCATTGTTTTTGGTATATTAGTGATTGTTCATGAGTTTGGTCATTTCTTCTTTGCGAA
ACGATCAGGAATCCTCGTTCGCGAATTTGCTATCGGTATGGGTCCGAAAATTTATGGGCATCAAGCAAAAGACGGGACAA
CATATACGCTTCGCCTATTACCTATTGGCGGTTATGTTCGAATGGCAGGCAATGGGGATGATGAAACAGAAATGGCACCA
GGTATGCCTCTTTCTCTTTTACTAAATTCTGACGGCATCGTAGAGAAGATAAATTTAAGTAAGAAAATCCAATTGACAAA
TGCTATCCCGATGGAATTGAGCCGTTATGATTTAGAAGATGAGCTGACTATCACTGGTTATGTGAATGGGGATGAAACAG
AAGTAGTGACCTATCCTGTCGATCACGATGCGACGATTATTGAAACCGACGGAACAGAAATCAGAATTGCACCAAAAGAT
GTACAGTTCCAATCGGCTAAACTGTGGCAGCGTATGCTGACCAATTTTGCCGGTCCGATGAATAACTTTATCTTGGCAAT
AGTGTTATTCATTATTCTTGCATTCATGCAAGGCGGTGTTCAAGTGACAAATACTAATCGTGTAGGAGAGATTATCCCTA
ATGGTGCTGCGGCAGAAGCAGGCTTAAAAGAAAATGATAAGGTAGTTAGTGTGGACGGTAAAGAAATCCACTCTTGGAAC
GATTTGACAACAGTCATCACGAAAAATCTAGGTAAAACATTAGATTTTGAGATCGAACGAGAAGGTAAGATGCAATCTGT
CGACGTGACACCGAAATCTGTAGAGTCAAATGGCGAAAAAGTTGGCCAACTTGGCATACAAGCCCCAATGAATACAGGTT
TTATGGATAAGATCATCGGCGGAACACGTCAAGCTTTTAGCGGTTCATTAGAAATTTTCAAAGCCTTAGGTTCACTGTTT
ACAGGTTTTAGTTTAGATAAATTAGGTGGGCCTGTTATGATGTACCAATTGTCTTCAGAAGCAGCAAACCAAGGTGTAAC
AACTGTTATTGGTTTGATGGCGCTTCTTTCAATGAACCTGGGAATCGTCAATCTGCTTCCAATCCCTGCCTTAGATGGTG
GGAAATTAGTGTTGAATATTTTTGAAGGGATTCGTGGGAAACCATTAAGTCAAGAAAAAGAAGGAATATTGACATTAGCT
GGCTTTGGATTTTTAATGTTGTTGACGGTGCTAGTTACATGGAACGATATTCAACGATTCTTTTTCTAG

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-408)

PDZ domain (PDZ_2)

(199-270)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

53.738

100

0.545
  eeP Streptococcus thermophilus LMG 18311

53.505

100

0.543