Detailed information NTG0082141

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: R8566_RS11375
• Genome accession: NZ_AP026920
• Coordinates: 2192530..2193627 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266660.1
• Uniprot ID: Q97N44
• Organism: Streptococcus pneumoniae strain PZ900700014
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2187530..2198627

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8566_RS11350 (PC0014_22200)	pgsA	2188051..2188596 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
R8566_RS11355 (PC0014_22210)	rodZ	2188607..2189428 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
R8566_RS11360 (PC0014_22220)	yfmH	2189470..2190753 (-)	1284	WP_000170212.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
R8566_RS11365 (PC0014_22230)	yfmF	2190750..2192000 (-)	1251	WP_000424271.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
R8566_RS11370 (PC0014_22240)	yaaA	2192159..2192527 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
R8566_RS11375 (PC0014_22250)	recF	2192530..2193627 (+)	1098	WP_000266660.1	DNA replication/repair protein RecF	Machinery gene
R8566_RS11380 (PC0014_22260)	guaB	2193678..2195156 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
R8566_RS11385 (PC0014_22270)	trpS	2195308..2196333 (-)	1026	WP_000165443.1	tryptophan--tRNA ligase	-
R8566_RS11390 (PC0014_22280)	-	2196539..2198161 (+)	1623	WP_000958769.1	ABC-F family ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41900.00 Da
• Isoelectric Point: 9.0596

>NTDB_id=82141 R8566_RS11375 WP_000266660.1 2192530..2193627(+) (recF) [Streptococcus pneumoniae strain PZ900700014]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=82141 R8566_RS11375 WP_000266660.1 2192530..2193627(+) (recF) [Streptococcus pneumoniae strain PZ900700014]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q97N44

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.726	100	0.997
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46