Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | QFC96_RS03420 | Genome accession | NZ_CP123581 |
| Coordinates | 660428..661429 (+) | Length | 333 a.a. |
| NCBI ID | WP_283534321.1 | Uniprot ID | - |
| Organism | Latilactobacillus curvatus strain ZHA1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 655428..666429
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QFC96_RS03380 (QFC96_03380) | - | 655604..656617 (+) | 1014 | WP_004265264.1 | YeiH family protein | - |
| QFC96_RS03385 (QFC96_03385) | - | 656708..656947 (-) | 240 | WP_004270892.1 | cytochrome b5 domain-containing protein | - |
| QFC96_RS03390 (QFC96_03390) | - | 657142..657477 (+) | 336 | WP_275780570.1 | hypothetical protein | - |
| QFC96_RS03400 (QFC96_03400) | - | 657658..658035 (-) | 378 | WP_056965888.1 | hypothetical protein | - |
| QFC96_RS03405 (QFC96_03405) | - | 658138..658638 (+) | 501 | WP_056965890.1 | VanZ family protein | - |
| QFC96_RS03410 (QFC96_03410) | - | 658728..659459 (+) | 732 | WP_004270897.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| QFC96_RS03415 (QFC96_03415) | comGA | 659563..660438 (+) | 876 | WP_004270904.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| QFC96_RS03420 (QFC96_03420) | comGB | 660428..661429 (+) | 1002 | WP_283534321.1 | type II secretion system F family protein | Machinery gene |
| QFC96_RS03425 (QFC96_03425) | comGC | 661426..661734 (+) | 309 | WP_004270901.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| QFC96_RS03430 (QFC96_03430) | - | 661715..662158 (+) | 444 | WP_039099484.1 | type II secretion system protein | - |
| QFC96_RS03435 (QFC96_03435) | - | 662145..662450 (+) | 306 | WP_283534322.1 | hypothetical protein | - |
| QFC96_RS03440 (QFC96_03440) | - | 662521..662901 (+) | 381 | WP_004270914.1 | ComGF family competence protein | - |
| QFC96_RS03445 (QFC96_03445) | - | 662879..663202 (+) | 324 | WP_254670611.1 | hypothetical protein | - |
| QFC96_RS03450 (QFC96_03450) | - | 663318..664337 (+) | 1020 | WP_307722871.1 | class I SAM-dependent methyltransferase | - |
| QFC96_RS03455 (QFC96_03455) | - | 664359..665552 (+) | 1194 | WP_283534323.1 | acetate kinase | - |
| QFC96_RS03460 (QFC96_03460) | - | 665612..666064 (+) | 453 | WP_283534324.1 | laaL | - |
Sequence
Protein
Download Length: 333 a.a. Molecular weight: 37866.02 Da Isoelectric Point: 9.6278
>NTDB_id=821369 QFC96_RS03420 WP_283534321.1 660428..661429(+) (comGB) [Latilactobacillus curvatus strain ZHA1]
MKTKTTVQFNTEFMLLLGRLLQNGFSLQQALEFMPIVFPTQKQWLHQVQTGLEAGKRLASSLAAVSFPAHLVAQIELTEL
QGNLGECLLHLGQLQRIQQKRRRELVGVIAYPCFLLLFLGALIGMMQIYLFPEIAQFNPTTSATSPLQLFFRVMGTFVIM
AGGLISVYLFRWHRRPLLQRLAAAFRWPFIGKTLQAYYQYCLLFDLATCLNNGLNLAEMHQLTHRLAKTSWLVQLMQQLE
TAVQKGGTLLANLADGVFYPPELQLVLAKGSQLQQMAKEVDLLAVIKYDELQRQLKQKVNWLQPLLFILIGIIIICTYLS
ILLPLYHTMEGIS
MKTKTTVQFNTEFMLLLGRLLQNGFSLQQALEFMPIVFPTQKQWLHQVQTGLEAGKRLASSLAAVSFPAHLVAQIELTEL
QGNLGECLLHLGQLQRIQQKRRRELVGVIAYPCFLLLFLGALIGMMQIYLFPEIAQFNPTTSATSPLQLFFRVMGTFVIM
AGGLISVYLFRWHRRPLLQRLAAAFRWPFIGKTLQAYYQYCLLFDLATCLNNGLNLAEMHQLTHRLAKTSWLVQLMQQLE
TAVQKGGTLLANLADGVFYPPELQLVLAKGSQLQQMAKEVDLLAVIKYDELQRQLKQKVNWLQPLLFILIGIIIICTYLS
ILLPLYHTMEGIS
Nucleotide
Download Length: 1002 bp
>NTDB_id=821369 QFC96_RS03420 WP_283534321.1 660428..661429(+) (comGB) [Latilactobacillus curvatus strain ZHA1]
ATGAAGACTAAAACCACTGTTCAATTCAATACTGAATTTATGTTGCTGTTAGGGCGCTTACTGCAAAATGGTTTTTCTTT
ACAACAAGCACTTGAGTTCATGCCGATTGTTTTTCCGACACAAAAGCAGTGGCTGCATCAGGTGCAAACTGGGTTAGAAG
CAGGAAAACGATTAGCATCAAGCTTAGCGGCGGTTTCGTTTCCAGCACACCTTGTTGCACAGATTGAATTGACTGAGTTG
CAGGGAAACTTAGGCGAGTGTTTGTTACATCTTGGCCAATTACAGCGAATTCAACAGAAACGGCGTAGAGAGTTAGTTGG
CGTAATTGCCTATCCCTGTTTTCTACTCCTTTTTCTCGGGGCGTTGATTGGGATGATGCAGATTTATCTTTTTCCGGAAA
TCGCGCAGTTTAACCCAACAACTTCGGCGACATCACCATTACAACTATTTTTTAGAGTGATGGGGACATTCGTTATTATG
GCTGGTGGTCTGATTAGTGTGTATTTATTCCGTTGGCATCGGCGACCGCTATTACAACGATTGGCGGCGGCATTTAGATG
GCCGTTCATCGGTAAAACGTTGCAGGCTTACTATCAGTATTGCTTATTATTTGATTTAGCGACTTGCCTGAATAACGGCT
TAAACTTGGCCGAAATGCATCAGCTTACACATCGTTTGGCGAAAACATCGTGGCTTGTACAATTAATGCAACAACTTGAA
ACGGCTGTCCAAAAGGGGGGCACGCTATTAGCGAACTTAGCGGATGGCGTTTTTTATCCACCTGAGCTGCAATTAGTGCT
CGCTAAGGGAAGTCAGTTACAACAGATGGCCAAGGAGGTTGATCTGCTTGCAGTCATTAAATACGATGAACTGCAACGGC
AATTGAAACAGAAGGTGAATTGGCTACAACCGCTCTTGTTTATCCTAATTGGGATCATCATTATTTGTACCTATCTCAGT
ATTTTATTACCGCTATATCATACAATGGAGGGAATTTCATGA
ATGAAGACTAAAACCACTGTTCAATTCAATACTGAATTTATGTTGCTGTTAGGGCGCTTACTGCAAAATGGTTTTTCTTT
ACAACAAGCACTTGAGTTCATGCCGATTGTTTTTCCGACACAAAAGCAGTGGCTGCATCAGGTGCAAACTGGGTTAGAAG
CAGGAAAACGATTAGCATCAAGCTTAGCGGCGGTTTCGTTTCCAGCACACCTTGTTGCACAGATTGAATTGACTGAGTTG
CAGGGAAACTTAGGCGAGTGTTTGTTACATCTTGGCCAATTACAGCGAATTCAACAGAAACGGCGTAGAGAGTTAGTTGG
CGTAATTGCCTATCCCTGTTTTCTACTCCTTTTTCTCGGGGCGTTGATTGGGATGATGCAGATTTATCTTTTTCCGGAAA
TCGCGCAGTTTAACCCAACAACTTCGGCGACATCACCATTACAACTATTTTTTAGAGTGATGGGGACATTCGTTATTATG
GCTGGTGGTCTGATTAGTGTGTATTTATTCCGTTGGCATCGGCGACCGCTATTACAACGATTGGCGGCGGCATTTAGATG
GCCGTTCATCGGTAAAACGTTGCAGGCTTACTATCAGTATTGCTTATTATTTGATTTAGCGACTTGCCTGAATAACGGCT
TAAACTTGGCCGAAATGCATCAGCTTACACATCGTTTGGCGAAAACATCGTGGCTTGTACAATTAATGCAACAACTTGAA
ACGGCTGTCCAAAAGGGGGGCACGCTATTAGCGAACTTAGCGGATGGCGTTTTTTATCCACCTGAGCTGCAATTAGTGCT
CGCTAAGGGAAGTCAGTTACAACAGATGGCCAAGGAGGTTGATCTGCTTGCAGTCATTAAATACGATGAACTGCAACGGC
AATTGAAACAGAAGGTGAATTGGCTACAACCGCTCTTGTTTATCCTAATTGGGATCATCATTATTTGTACCTATCTCAGT
ATTTTATTACCGCTATATCATACAATGGAGGGAATTTCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Latilactobacillus sakei subsp. sakei 23K |
56.973 |
100 |
0.577 |