Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   QAO71_RS00855 Genome accession   NZ_CP123445
Coordinates   183318..183734 (+) Length   138 a.a.
NCBI ID   WP_036992025.1    Uniprot ID   A0A4U0YUG3
Organism   Halopseudomonas sp. SMJS2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 178318..188734
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAO71_RS00825 (QAO71_00825) - 178571..179566 (-) 996 WP_280165038.1 aspartate carbamoyltransferase catalytic subunit -
  QAO71_RS00830 (QAO71_00830) pyrR 179574..180086 (-) 513 WP_036991395.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  QAO71_RS00835 (QAO71_00835) ruvX 180083..180523 (-) 441 WP_136868477.1 Holliday junction resolvase RuvX -
  QAO71_RS00840 (QAO71_00840) - 180523..181092 (-) 570 WP_036991392.1 YqgE/AlgH family protein -
  QAO71_RS00845 (QAO71_00845) - 181175..182080 (-) 906 WP_036992026.1 energy transducer TonB -
  QAO71_RS00850 (QAO71_00850) gshB 182144..183106 (-) 963 WP_036991390.1 glutathione synthase -
  QAO71_RS00855 (QAO71_00855) pilG 183318..183734 (+) 417 WP_036992025.1 twitching motility response regulator PilG Regulator
  QAO71_RS00860 (QAO71_00860) pilH 183772..184137 (+) 366 WP_036991389.1 twitching motility response regulator PilH -
  QAO71_RS00865 (QAO71_00865) - 184176..184712 (+) 537 WP_036991387.1 chemotaxis protein CheW -
  QAO71_RS00870 (QAO71_00870) - 184793..186829 (+) 2037 WP_136868475.1 methyl-accepting chemotaxis protein -
  QAO71_RS00875 (QAO71_00875) - 186925..187764 (+) 840 WP_143063046.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 138 a.a.        Molecular weight: 15033.36 Da        Isoelectric Point: 7.1350

>NTDB_id=821124 QAO71_RS00855 WP_036992025.1 183318..183734(+) (pilG) [Halopseudomonas sp. SMJS2]
MDENFESLKVMVIDDSKTIRRTAETLLKKVGCNVITAVDGFDALAKIADNHPDIIFVDIMMPRLDGYQTCALIKNNSAFR
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIRAHVPQSETKVAGSAGA

Nucleotide


Download         Length: 417 bp        

>NTDB_id=821124 QAO71_RS00855 WP_036992025.1 183318..183734(+) (pilG) [Halopseudomonas sp. SMJS2]
ATGGATGAAAATTTCGAGAGCCTGAAAGTCATGGTGATTGATGACAGCAAGACCATTCGGCGCACTGCGGAAACGCTGCT
GAAAAAGGTCGGATGTAACGTCATTACCGCTGTTGACGGCTTTGATGCCCTGGCCAAGATCGCTGACAATCACCCCGATA
TCATCTTTGTCGACATCATGATGCCCCGTCTTGATGGCTATCAGACCTGCGCGTTGATCAAGAACAATTCGGCGTTCCGC
TCCACCCCGGTGATCATGCTGTCCAGCAAGGACGGGCTGTTTGACAAGGCCAAGGGGCGTATCGTCGGCTCCGATCAATA
TCTGACCAAGCCATTCAGCAAGGAAGAACTGCTGGGCGCCATCCGGGCCCACGTTCCGCAGTCGGAAACCAAAGTGGCCG
GATCCGCGGGGGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U0YUG3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.6

90.58

0.703
  vicR Streptococcus mutans UA159

42.975

87.681

0.377