Detailed information NTG0820362

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: R4540_RS11495
• Genome accession: NZ_CP137135
• Coordinates: 2531936..2533336 (+)
• Length: 466 a.a.
• NCBI ID: WP_000086389.1
• Uniprot ID: -
• Organism: Vibrio cholerae V52
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 2526936..2538336

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4540_RS11475 (R4540_11470)	-	2528084..2528407 (-)	324	WP_000244705.1	hypothetical protein	-
R4540_RS11480 (R4540_11475)	glnA	2528552..2529961 (+)	1410	WP_000110151.1	glutamate--ammonia ligase	-
R4540_RS11485 (R4540_11480)	-	2530139..2530729 (+)	591	WP_000099255.1	DUF4124 domain-containing protein	-
R4540_RS11490 (R4540_11485)	glnL	2530868..2531926 (+)	1059	WP_001918943.1	nitrogen regulation protein NR(II)	-
R4540_RS11495 (R4540_11490)	luxO	2531936..2533336 (+)	1401	WP_000086389.1	nitrogen regulation protein NR(I)	Regulator
R4540_RS11500 (R4540_11495)	-	2533395..2535926 (+)	2532	WP_001128660.1	EAL domain-containing protein	-
R4540_RS11505 (R4540_11500)	add	2536018..2537022 (+)	1005	WP_000633281.1	adenosine deaminase	-

Sequence

Protein

• Length: 466 a.a.
• Molecular weight: 52319.80 Da
• Isoelectric Point: 6.6387

>NTDB_id=820362 R4540_RS11495 WP_000086389.1 2531936..2533336(+) (luxO) [Vibrio cholerae V52]
MSRGYVWVVDDDSSIRWVMEKTLSSAHIKCETFADAESVLLALERETPDVLVSDIRMPGMDGIALLNQVHQRTPELPVII
MTAHSDLDAAVNAYQQGAFEYLPKPFDVDETLTLVERAIAHGQEQRKTSHRPSENYSAPEIIGEAPAMQEVFRAIGRLSR
SSISVLINGESGTGKELVAHALHRHSPRAQKPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQANGGTLFLD
EIGDMPLDIQTRLLRVLADGQFYRVGGHVAIKVDVRIVAATHQNLEKLVHQGKFREDLFHRLNVIRIHIPSLRERRQDIE
KLTKHFLALAAKELGVEMKTLNPRTVDILTKLDWPGNVRQLENMCRWLTVMASGSEVLPSDLPSELLSERKASHFDNDIS
WQKQLETWAKSALASGETELLAYALPEFERILLEAALHHTNGHKQEAAKVLGWGRNTLTRKLKELY

Nucleotide

• Length: 1401 bp

>NTDB_id=820362 R4540_RS11495 WP_000086389.1 2531936..2533336(+) (luxO) [Vibrio cholerae V52]
ATGAGTAGAGGATACGTCTGGGTTGTCGATGATGATAGTTCCATTCGCTGGGTAATGGAGAAAACGCTCTCTTCAGCCCA
TATAAAATGCGAAACCTTCGCAGATGCGGAAAGCGTACTGCTGGCACTGGAGCGTGAAACCCCCGACGTTCTTGTCTCAG
ATATTCGCATGCCAGGGATGGATGGCATTGCTCTGCTCAATCAAGTACACCAACGCACCCCTGAACTTCCGGTGATCATT
ATGACCGCGCATTCGGATCTGGATGCCGCCGTCAATGCCTACCAACAAGGTGCCTTTGAGTATCTTCCCAAGCCTTTTGA
TGTCGATGAAACCCTCACCTTAGTCGAACGTGCCATCGCTCATGGTCAAGAGCAGCGCAAGACATCTCATCGTCCCAGTG
AAAACTATTCCGCCCCTGAAATCATTGGCGAAGCGCCGGCTATGCAAGAAGTGTTTCGCGCAATTGGTCGCTTATCACGC
TCTTCGATTTCGGTATTGATCAACGGTGAATCGGGAACCGGTAAAGAATTGGTCGCTCATGCTCTGCATAGACATAGTCC
TCGTGCCCAAAAGCCGTTTATTGCCCTCAATATGGCGGCGATTCCCAAAGATCTCATCGAATCTGAACTGTTTGGCCATG
AAAAAGGCGCGTTTACTGGTGCAAATACCGTGCGCCAAGGTCGCTTCGAACAAGCCAATGGCGGCACTTTATTTCTTGAT
GAAATTGGCGATATGCCGCTCGATATTCAAACTCGGTTATTGCGCGTGTTGGCGGATGGTCAGTTTTATCGCGTTGGCGG
TCATGTCGCGATAAAAGTCGATGTGCGAATCGTCGCAGCCACTCACCAAAATCTTGAAAAACTGGTTCATCAAGGCAAAT
TTCGTGAAGACTTATTCCATCGTCTGAACGTTATTCGCATCCATATCCCGTCACTGCGTGAACGTCGACAAGATATTGAA
AAGCTCACTAAGCACTTTTTAGCGCTGGCAGCCAAAGAGCTCGGAGTGGAGATGAAAACGCTCAACCCGCGCACCGTGGA
TATTCTGACCAAGCTCGATTGGCCGGGTAACGTGCGCCAACTCGAAAACATGTGTCGCTGGCTCACGGTGATGGCAAGTG
GAAGTGAAGTGCTGCCAAGTGATCTTCCTTCCGAATTATTATCAGAAAGGAAAGCCAGCCATTTTGATAATGATATAAGT
TGGCAGAAACAGTTAGAAACATGGGCAAAATCTGCACTGGCCTCCGGTGAAACCGAGTTGCTTGCCTACGCACTCCCAGA
ATTTGAACGTATACTTTTAGAAGCGGCACTTCACCACACCAATGGACATAAACAAGAAGCCGCCAAAGTATTGGGCTGGG
GACGGAATACGCTAACACGTAAACTCAAAGAGTTATATTAA

Domains

Predicted by InterProScan.

• Sigma-54 interaction domain (Sigma54_activat) (141-308)

• Bacterial regulatory protein, Fis family (HTH_8) (425-465)

• Response regulator receiver domain (Response_reg) (6-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	37.662	99.142	0.373
pilR	Pseudomonas aeruginosa PAK	37.419	99.785	0.373