Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   QAO56_RS04750 Genome accession   NZ_CP123156
Coordinates   982602..983588 (+) Length   328 a.a.
NCBI ID   WP_000959271.1    Uniprot ID   -
Organism   Staphylococcus aureus strain GE-MRSA16     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 977602..988588
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAO56_RS04725 (QAO56_04710) opp4B 977814..978776 (+) 963 WP_000593421.1 oligopeptide ABC transporter permease -
  QAO56_RS04730 (QAO56_04715) opp4C 978788..979669 (+) 882 WP_001180265.1 oligopeptide ABC transporter permease -
  QAO56_RS04735 (QAO56_04720) trpS 979711..980700 (-) 990 WP_000448938.1 tryptophan--tRNA ligase -
  QAO56_RS04740 (QAO56_04725) spxA 980995..981390 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  QAO56_RS04745 (QAO56_04730) mecA 981762..982481 (+) 720 WP_001217728.1 adaptor protein MecA -
  QAO56_RS04750 (QAO56_04735) coiA 982602..983588 (+) 987 WP_000959271.1 competence protein CoiA Machinery gene
  QAO56_RS04755 (QAO56_04740) pepF 983636..985444 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  QAO56_RS04760 (QAO56_04745) yjbH 985904..986710 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  QAO56_RS04765 (QAO56_04750) - 986733..987098 (-) 366 WP_000214067.1 truncated hemoglobin YjbI -
  QAO56_RS04770 (QAO56_04755) - 987202..987795 (-) 594 WP_000224615.1 CYTH domain-containing protein -
  QAO56_RS04775 (QAO56_04760) - 987981..988328 (+) 348 WP_001242102.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38849.49 Da        Isoelectric Point: 9.7732

>NTDB_id=819650 QAO56_RS04750 WP_000959271.1 982602..983588(+) (coiA) [Staphylococcus aureus strain GE-MRSA16]
MLVALNEEKERVLATTALRKIKYFCPVCGKQVILKRGLKVISHFAHKHLTEQKCFNNESFKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSIFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLLSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSNR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=819650 QAO56_RS04750 WP_000959271.1 982602..983588(+) (coiA) [Staphylococcus aureus strain GE-MRSA16]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGATAAAATATTTTTGTCCGGT
GTGTGGTAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAACGGAACAAAAAT
GTTTTAATAATGAATCGTTTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAACCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATATTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATACTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTACTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAAATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-304)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.037

100

0.96
  coiA Staphylococcus aureus MW2

95.732

100

0.957