Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   QAY58_RS02150 Genome accession   NZ_CP123144
Coordinates   396618..397304 (+) Length   228 a.a.
NCBI ID   WP_001802022.1    Uniprot ID   A0A7U7EYP5
Organism   Staphylococcus aureus strain GE-MRSA20     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 391618..402304
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAY58_RS02115 (QAY58_02110) yqeH 392145..393245 (+) 1101 WP_001280137.1 ribosome biogenesis GTPase YqeH -
  QAY58_RS02120 (QAY58_02115) aroE 393259..394065 (+) 807 WP_000666757.1 shikimate dehydrogenase -
  QAY58_RS02125 (QAY58_02120) yhbY 394069..394359 (+) 291 WP_000955235.1 ribosome assembly RNA-binding protein YhbY -
  QAY58_RS02130 (QAY58_02125) nadD 394362..394931 (+) 570 WP_000725167.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  QAY58_RS02135 (QAY58_02130) yqeK 394921..395505 (+) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  QAY58_RS02140 (QAY58_02135) rsfS 395506..395859 (+) 354 WP_001088020.1 ribosome silencing factor -
  QAY58_RS02145 (QAY58_02140) - 395862..396578 (+) 717 WP_000084830.1 class I SAM-dependent DNA methyltransferase -
  QAY58_RS02150 (QAY58_02145) comEA 396618..397304 (+) 687 WP_001802022.1 ComEA family DNA-binding protein Machinery gene
  QAY58_RS02155 (QAY58_02150) - 397396..397857 (+) 462 WP_000439693.1 ComE operon protein 2 -
  QAY58_RS02160 (QAY58_02155) comEC 397862..400063 (+) 2202 WP_001557362.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  QAY58_RS02165 (QAY58_02160) holA 400120..401094 (+) 975 WP_103145934.1 DNA polymerase III subunit delta -
  QAY58_RS02170 (QAY58_02165) rpsT 401139..401390 (-) 252 WP_001274017.1 30S ribosomal protein S20 -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25900.65 Da        Isoelectric Point: 9.6751

>NTDB_id=819476 QAY58_RS02150 WP_001802022.1 396618..397304(+) (comEA) [Staphylococcus aureus strain GE-MRSA20]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENNSLSKLEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSRINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTI

Nucleotide


Download         Length: 687 bp        

>NTDB_id=819476 QAY58_RS02150 WP_001802022.1 396618..397304(+) (comEA) [Staphylococcus aureus strain GE-MRSA20]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAGTGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAATAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCGAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGAAGTAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACCGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGATATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7EYP5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus N315

100

100

1
  comEA Staphylococcus aureus MW2

97.368

100

0.974