Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   QAO18_RS05390 Genome accession   NZ_CP123121
Coordinates   1076836..1077822 (-) Length   328 a.a.
NCBI ID   WP_000959286.1    Uniprot ID   A0AAX2MRT0
Organism   Staphylococcus aureus strain GE-MSSA38     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 1071836..1082822
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAO18_RS05365 (QAO18_05350) - 1072096..1072443 (-) 348 WP_001242102.1 hypothetical protein -
  QAO18_RS05370 (QAO18_05355) - 1072629..1073222 (+) 594 WP_000224622.1 CYTH domain-containing protein -
  QAO18_RS05375 (QAO18_05360) - 1073326..1073691 (+) 366 WP_000214070.1 truncated hemoglobin YjbI -
  QAO18_RS05380 (QAO18_05365) yjbH 1073714..1074520 (+) 807 WP_000896697.1 protease adaptor protein YjbH -
  QAO18_RS05385 (QAO18_05370) pepF 1074980..1076788 (-) 1809 WP_000082725.1 oligoendopeptidase F -
  QAO18_RS05390 (QAO18_05375) coiA 1076836..1077822 (-) 987 WP_000959286.1 competence protein CoiA Machinery gene
  QAO18_RS05395 (QAO18_05380) mecA 1077943..1078662 (-) 720 WP_001217724.1 adaptor protein MecA -
  QAO18_RS05400 (QAO18_05385) tnpA 1079078..1079563 (-) 486 WP_000093392.1 IS200/IS605 family transposase -
  QAO18_RS05405 (QAO18_05390) spxA 1079775..1080170 (-) 396 WP_000258001.1 transcriptional regulator SpxA -
  QAO18_RS05410 (QAO18_05395) trpS 1080465..1081454 (+) 990 WP_000448941.1 tryptophan--tRNA ligase -
  QAO18_RS05415 (QAO18_05400) - 1081480..1081989 (-) 510 Protein_1038 transposase -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38770.45 Da        Isoelectric Point: 9.5881

>NTDB_id=819071 QAO18_RS05390 WP_000959286.1 1076836..1077822(-) (coiA) [Staphylococcus aureus strain GE-MSSA38]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSLFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKIIELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLLLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=819071 QAO18_RS05390 WP_000959286.1 1076836..1077822(-) (coiA) [Staphylococcus aureus strain GE-MSSA38]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTTTGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTTGCTGA
AAAAAGGAATGCCAAAATTATTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCCGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCTATTGAGTG
GCAATTACAAGTTGATTTATTGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAACCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

99.085

100

0.991
  coiA Staphylococcus aureus MW2

97.866

100

0.979