Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   QAO48_RS05405 Genome accession   NZ_CP123119
Coordinates   1077688..1078674 (-) Length   328 a.a.
NCBI ID   WP_053014725.1    Uniprot ID   -
Organism   Staphylococcus aureus strain GE-MSSA41     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 1072688..1083674
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAO48_RS05380 (QAO48_05365) - 1072948..1073295 (-) 348 WP_001242102.1 hypothetical protein -
  QAO48_RS05385 (QAO48_05370) - 1073481..1074074 (+) 594 WP_000224622.1 CYTH domain-containing protein -
  QAO48_RS05390 (QAO48_05375) - 1074178..1074543 (+) 366 WP_000214070.1 truncated hemoglobin YjbI -
  QAO48_RS05395 (QAO48_05380) yjbH 1074566..1075372 (+) 807 WP_000896697.1 protease adaptor protein YjbH -
  QAO48_RS05400 (QAO48_05385) pepF 1075832..1077640 (-) 1809 WP_000082725.1 oligoendopeptidase F -
  QAO48_RS05405 (QAO48_05390) coiA 1077688..1078674 (-) 987 WP_053014725.1 competence protein CoiA Machinery gene
  QAO48_RS05410 (QAO48_05395) mecA 1078795..1079514 (-) 720 WP_001217724.1 adaptor protein MecA -
  QAO48_RS05415 (QAO48_05400) tnpA 1079930..1080415 (-) 486 WP_000093392.1 IS200/IS605 family transposase -
  QAO48_RS05420 (QAO48_05405) spxA 1080627..1081022 (-) 396 WP_000258001.1 transcriptional regulator SpxA -
  QAO48_RS05425 (QAO48_05410) trpS 1081317..1082306 (+) 990 WP_000448941.1 tryptophan--tRNA ligase -
  QAO48_RS05430 (QAO48_05415) - 1082332..1082841 (-) 510 Protein_1041 transposase -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38830.49 Da        Isoelectric Point: 9.6355

>NTDB_id=819029 QAO48_RS05405 WP_053014725.1 1077688..1078674(-) (coiA) [Staphylococcus aureus strain GE-MSSA41]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSLFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKIIELFNEAPCDYHAVYKLSKFAINQYIKYYRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLLLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=819029 QAO48_RS05405 WP_053014725.1 1077688..1078674(-) (coiA) [Staphylococcus aureus strain GE-MSSA41]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTTTGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTTGCTGA
AAAAAGGAATGCCAAAATTATTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTATCGCTGGCAAAATTCCGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCTATTGAGTG
GCAATTACAAGTTGATTTATTGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAACCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

98.78

100

0.988
  coiA Staphylococcus aureus MW2

97.561

100

0.976