Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   QAO20_RS08385 Genome accession   NZ_CP123106
Coordinates   1743642..1744529 (+) Length   295 a.a.
NCBI ID   WP_000143430.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IT-MSSA50     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1738642..1749529
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAO20_RS08355 (QAO20_08315) - 1739378..1740139 (+) 762 WP_000323452.1 alpha/beta hydrolase -
  QAO20_RS08360 (QAO20_08320) - 1740380..1740835 (+) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  QAO20_RS08365 (QAO20_08325) - 1740957..1741058 (+) 102 WP_000731972.1 SE2200 family small protein -
  QAO20_RS08370 (QAO20_08330) - 1741118..1742542 (-) 1425 WP_000953740.1 alkaline phosphatase -
  QAO20_RS08375 (QAO20_08335) - 1742740..1742940 (+) 201 WP_000604725.1 hypothetical protein -
  QAO20_RS08380 (QAO20_08340) braR 1742966..1743631 (+) 666 WP_000697883.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  QAO20_RS08385 (QAO20_08345) braS 1743642..1744529 (+) 888 WP_000143430.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  QAO20_RS08390 (QAO20_08350) - 1744637..1745392 (+) 756 WP_000923769.1 ABC transporter ATP-binding protein -
  QAO20_RS08395 (QAO20_08355) - 1745389..1747389 (+) 2001 WP_000776748.1 ABC transporter permease -
  QAO20_RS08400 (QAO20_08360) - 1748048..1748161 (+) 114 WP_031918517.1 hypothetical protein -
  QAO20_RS08405 (QAO20_08365) - 1748543..1748803 (+) 261 WP_078056482.1 hypothetical protein -
  QAO20_RS08410 (QAO20_08370) - 1748813..1749310 (+) 498 WP_001065273.1 glutathione peroxidase -
  QAO20_RS08415 (QAO20_08375) - 1749418..1749510 (-) 93 WP_031918515.1 hypothetical protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34034.25 Da        Isoelectric Point: 5.6141

>NTDB_id=818821 QAO20_RS08385 WP_000143430.1 1743642..1744529(+) (braS) [Staphylococcus aureus strain IT-MSSA50]
MTFLKSITQETAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIEDLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=818821 QAO20_RS08385 WP_000143430.1 1743642..1744529(+) (braS) [Staphylococcus aureus strain IT-MSSA50]
ATGACCTTTCTTAAAAGTATTACTCAGGAAACAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAGACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ATTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATCGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAACAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGGCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

98.644

100

0.986