Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   QAO20_RS03345 Genome accession   NZ_CP123106
Coordinates   693203..694189 (-) Length   328 a.a.
NCBI ID   WP_000959299.1    Uniprot ID   A0A8G2M896
Organism   Staphylococcus aureus strain IT-MSSA50     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 688203..699189
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAO20_RS03320 (QAO20_03310) - 688463..688810 (-) 348 WP_001242107.1 hypothetical protein -
  QAO20_RS03325 (QAO20_03315) - 688996..689589 (+) 594 WP_000224622.1 CYTH domain-containing protein -
  QAO20_RS03330 (QAO20_03320) - 689693..690058 (+) 366 WP_000214064.1 truncated hemoglobin YjbI -
  QAO20_RS03335 (QAO20_03325) yjbH 690081..690887 (+) 807 WP_000896697.1 protease adaptor protein YjbH -
  QAO20_RS03340 (QAO20_03330) pepF 691347..693155 (-) 1809 WP_000082725.1 oligoendopeptidase F -
  QAO20_RS03345 (QAO20_03335) coiA 693203..694189 (-) 987 WP_000959299.1 competence protein CoiA Machinery gene
  QAO20_RS03350 (QAO20_03340) mecA 694311..695030 (-) 720 WP_001217728.1 adaptor protein MecA -
  QAO20_RS03355 (QAO20_03345) spxA 695402..695797 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  QAO20_RS03360 (QAO20_03350) trpS 696092..697081 (+) 990 WP_111065217.1 tryptophan--tRNA ligase -
  QAO20_RS03365 (QAO20_03355) opp4C 697123..698004 (-) 882 WP_001180271.1 oligopeptide ABC transporter permease -
  QAO20_RS03370 (QAO20_03360) opp4B 698016..698978 (-) 963 WP_000593415.1 oligopeptide ABC transporter permease -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38719.32 Da        Isoelectric Point: 9.7781

>NTDB_id=818809 QAO20_RS03345 WP_000959299.1 693203..694189(-) (coiA) [Staphylococcus aureus strain IT-MSSA50]
MLVALNGEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLLSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSNR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=818809 QAO20_RS03345 WP_000959299.1 693203..694189(-) (coiA) [Staphylococcus aureus strain IT-MSSA50]
ATGTTAGTAGCTTTAAATGGAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATACTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTACTAAGTGACAATCTTAATTATTTTAAATTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAAATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(10-307)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.646

100

0.966
  coiA Staphylococcus aureus MW2

96.646

100

0.966