Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   QAY65_RS02160 Genome accession   NZ_CP123102
Coordinates   401877..402563 (+) Length   228 a.a.
NCBI ID   WP_001802022.1    Uniprot ID   A0A7U7EYP5
Organism   Staphylococcus aureus strain IT-MSSA54     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 396877..407563
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAY65_RS02125 (QAY65_02140) yqeH 397404..398504 (+) 1101 WP_001280137.1 ribosome biogenesis GTPase YqeH -
  QAY65_RS02130 (QAY65_02145) aroE 398518..399324 (+) 807 WP_000666757.1 shikimate dehydrogenase -
  QAY65_RS02135 (QAY65_02150) yhbY 399328..399618 (+) 291 WP_000955235.1 ribosome assembly RNA-binding protein YhbY -
  QAY65_RS02140 (QAY65_02155) nadD 399621..400190 (+) 570 WP_000725167.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  QAY65_RS02145 (QAY65_02160) yqeK 400180..400764 (+) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  QAY65_RS02150 (QAY65_02165) rsfS 400765..401118 (+) 354 WP_001088020.1 ribosome silencing factor -
  QAY65_RS02155 (QAY65_02170) - 401121..401837 (+) 717 WP_000084830.1 class I SAM-dependent DNA methyltransferase -
  QAY65_RS02160 (QAY65_02175) comEA 401877..402563 (+) 687 WP_001802022.1 ComEA family DNA-binding protein Machinery gene
  QAY65_RS02165 (QAY65_02180) - 402655..403116 (+) 462 WP_000439693.1 ComE operon protein 2 -
  QAY65_RS02170 (QAY65_02185) comEC 403121..405322 (+) 2202 WP_001557362.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  QAY65_RS02175 (QAY65_02190) holA 405379..406353 (+) 975 WP_001282563.1 DNA polymerase III subunit delta -
  QAY65_RS02180 (QAY65_02195) rpsT 406398..406649 (-) 252 WP_001274017.1 30S ribosomal protein S20 -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25900.65 Da        Isoelectric Point: 9.6751

>NTDB_id=818719 QAY65_RS02160 WP_001802022.1 401877..402563(+) (comEA) [Staphylococcus aureus strain IT-MSSA54]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENNSLSKLEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSRINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTI

Nucleotide


Download         Length: 687 bp        

>NTDB_id=818719 QAY65_RS02160 WP_001802022.1 401877..402563(+) (comEA) [Staphylococcus aureus strain IT-MSSA54]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAGTGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAATAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCGAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGAAGTAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACCGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGATATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7EYP5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus N315

100

100

1
  comEA Staphylococcus aureus MW2

97.368

100

0.974