Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   QAY62_RS02315 Genome accession   NZ_CP123097
Coordinates   427856..428542 (+) Length   228 a.a.
NCBI ID   WP_078059847.1    Uniprot ID   -
Organism   Staphylococcus aureus strain MRSA-ATCC43300     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 422856..433542
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAY62_RS02280 (QAY62_02265) yqeH 423383..424483 (+) 1101 WP_001280132.1 ribosome biogenesis GTPase YqeH -
  QAY62_RS02285 (QAY62_02270) aroE 424497..425303 (+) 807 WP_000666750.1 shikimate dehydrogenase -
  QAY62_RS02290 (QAY62_02275) yhbY 425307..425597 (+) 291 WP_000955232.1 ribosome assembly RNA-binding protein YhbY -
  QAY62_RS02295 (QAY62_02280) nadD 425600..426169 (+) 570 WP_000822938.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  QAY62_RS02300 (QAY62_02285) yqeK 426159..426743 (+) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  QAY62_RS02305 (QAY62_02290) rsfS 426744..427097 (+) 354 WP_001088020.1 ribosome silencing factor -
  QAY62_RS02310 (QAY62_02295) - 427100..427816 (+) 717 WP_000084835.1 class I SAM-dependent DNA methyltransferase -
  QAY62_RS02315 (QAY62_02300) comEA 427856..428542 (+) 687 WP_078059847.1 ComEA family DNA-binding protein Machinery gene
  QAY62_RS02320 (QAY62_02305) - 428634..429095 (+) 462 WP_000439692.1 ComE operon protein 2 -
  QAY62_RS02325 (QAY62_02310) comEC 429100..431301 (+) 2202 WP_000967506.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  QAY62_RS02330 (QAY62_02315) holA 431358..432332 (+) 975 WP_001282570.1 DNA polymerase III subunit delta -
  QAY62_RS02335 (QAY62_02320) rpsT 432377..432628 (-) 252 WP_001274017.1 30S ribosomal protein S20 -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25768.35 Da        Isoelectric Point: 9.3383

>NTDB_id=818634 QAY62_RS02315 WP_078059847.1 427856..428542(+) (comEA) [Staphylococcus aureus strain MRSA-ATCC43300]
MVLLYQFLLRYKDFLAQWKLYTISAVVLIMVLIGFIFWRQDDYTSRDFENKDTVLKQSTSENSSLSKLEDVQVKDGDNSK
NKGPVYVDIKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLTDQKMIFIPHKAQKNVEPQFGANSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLNSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=818634 QAY62_RS02315 WP_078059847.1 427856..428542(+) (comEA) [Staphylococcus aureus strain MRSA-ATCC43300]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAGCTCAATGGAAGTTATATACTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAGATTTTGAAAATAAAGATACTG
TTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATATAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTAGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATTCCTCATAAAGCACAAAAGAATGTTGAACCACAATTTGGAGCAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAATTCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

94.714

99.561

0.943
  comEA Staphylococcus aureus N315

94.714

99.561

0.943