Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   R4703_RS02470 Genome accession   NZ_CP137100
Coordinates   459302..459979 (-) Length   225 a.a.
NCBI ID   WP_000548959.1    Uniprot ID   Q9S1K2
Organism   Streptococcus pneumoniae strain LYP     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 454302..464979
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R4703_RS02445 - 454474..455103 (-) 630 WP_000762078.1 NAD(P)-dependent oxidoreductase -
  R4703_RS02450 - 455342..455705 (+) 364 Protein_488 hypothetical protein -
  R4703_RS02455 - 455962..456285 (+) 324 WP_000422776.1 MazG-like protein -
  R4703_RS02460 thrS 456343..458286 (+) 1944 WP_000608349.1 threonine--tRNA ligase -
  R4703_RS02465 - 458335..459309 (-) 975 WP_000887954.1 HAMP domain-containing histidine kinase -
  R4703_RS02470 braR 459302..459979 (-) 678 WP_000548959.1 response regulator transcription factor Regulator
  R4703_RS02475 - 460135..461208 (+) 1074 WP_001273825.1 DUF2974 domain-containing protein -
  R4703_RS02480 - 461299..461601 (-) 303 WP_000281608.1 hypothetical protein -
  R4703_RS02485 - 461669..462106 (-) 438 WP_001166786.1 Rrf2 family transcriptional regulator -
  R4703_RS02490 - 462182..463024 (-) 843 WP_000160934.1 metallophosphoesterase -
  R4703_RS02495 - 463136..463786 (+) 651 WP_000188498.1 metal-dependent transcriptional regulator -
  R4703_RS02500 dtd 464403..464846 (-) 444 WP_000691400.1 D-aminoacyl-tRNA deacylase -

Sequence

Protein


Download         Length: 225 a.a.        Molecular weight: 25964.16 Da        Isoelectric Point: 5.1362

>NTDB_id=818403 R4703_RS02470 WP_000548959.1 459302..459979(-) (braR) [Streptococcus pneumoniae strain LYP]
MHKILLIEDDQVIRQQIGKMLSEWGFEVVLVEDFMEVLSLFVQSEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS
RDQAMDIVMAINMGADDFVTKPFDQQVLLAKVQGLLRRSYEFGRDESLLEYAGVILNTKSMDLHYQGQVLNLTKNEFQIL
RVLFEHAGNIVARDDLMRELWNSDFFIDDNTLSVNVARLRKKLEEQGLVGFIETKKGIGYGLKHA

Nucleotide


Download         Length: 678 bp        

>NTDB_id=818403 R4703_RS02470 WP_000548959.1 459302..459979(-) (braR) [Streptococcus pneumoniae strain LYP]
ATGCACAAGATTTTATTAATAGAAGATGATCAGGTCATTCGTCAACAGATTGGGAAAATGCTCTCTGAATGGGGATTTGA
AGTGGTCCTGGTAGAAGACTTTATGGAAGTTTTGAGTCTATTTGTTCAGTCGGAACCTCATCTGGTCCTCATGGATATTG
GTTTGCCCTTGTTTAATGGTTATCACTGGTGTCAGGAAATCCGCAAGATTTCCAAGGTACCTATCATGTTTCTTTCTTCG
AGAGACCAGGCTATGGATATTGTCATGGCAATCAATATGGGGGCGGATGACTTTGTGACCAAGCCTTTTGACCAGCAGGT
TCTTTTAGCTAAGGTTCAGGGCTTGTTGCGTCGTTCCTATGAGTTTGGGCGTGATGAGAGTTTGCTGGAATATGCTGGTG
TTATCCTCAATACCAAATCCATGGATTTACATTATCAAGGGCAAGTCTTGAATTTGACCAAGAATGAATTCCAGATTTTA
CGCGTGTTATTTGAGCATGCAGGCAACATCGTAGCACGTGACGACCTGATGCGGGAACTTTGGAACAGTGACTTTTTCAT
TGATGATAATACCCTCTCTGTCAATGTGGCTCGTTTGCGTAAAAAGTTGGAGGAGCAGGGATTGGTAGGATTTATCGAGA
CCAAGAAAGGAATAGGGTACGGATTGAAGCATGCTTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9S1K2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

48.624

96.889

0.471
  vicR Streptococcus mutans UA159

35.319

100

0.369