Detailed information NTG0818262

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: R4535_RS12245
• Genome accession: NZ_CP137091
• Coordinates: 2711343..2712743 (+)
• Length: 466 a.a.
• NCBI ID: WP_000086389.1
• Uniprot ID: -
• Organism: Vibrio cholerae strain DL4211
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 2706343..2717743

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4535_RS12225 (R4535_12200)	-	2707491..2707814 (-)	324	WP_000244707.1	hypothetical protein	-
R4535_RS12230 (R4535_12205)	glnA	2707959..2709368 (+)	1410	WP_000110151.1	glutamate--ammonia ligase	-
R4535_RS12235 (R4535_12210)	-	2709546..2710136 (+)	591	WP_033932974.1	DUF4124 domain-containing protein	-
R4535_RS12240 (R4535_12215)	glnL	2710275..2711333 (+)	1059	WP_001935745.1	nitrogen regulation protein NR(II)	-
R4535_RS12245 (R4535_12220)	luxO	2711343..2712743 (+)	1401	WP_000086389.1	nitrogen regulation protein NR(I)	Regulator
R4535_RS12250 (R4535_12225)	-	2712802..2715333 (+)	2532	WP_069648423.1	GGDEF and EAL domain-containing protein	-
R4535_RS12255 (R4535_12230)	add	2715425..2716429 (+)	1005	WP_069216991.1	adenosine deaminase	-

Sequence

Protein

• Length: 466 a.a.
• Molecular weight: 52319.80 Da
• Isoelectric Point: 6.6387

>NTDB_id=818262 R4535_RS12245 WP_000086389.1 2711343..2712743(+) (luxO) [Vibrio cholerae strain DL4211]
MSRGYVWVVDDDSSIRWVMEKTLSSAHIKCETFADAESVLLALERETPDVLVSDIRMPGMDGIALLNQVHQRTPELPVII
MTAHSDLDAAVNAYQQGAFEYLPKPFDVDETLTLVERAIAHGQEQRKTSHRPSENYSAPEIIGEAPAMQEVFRAIGRLSR
SSISVLINGESGTGKELVAHALHRHSPRAQKPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQANGGTLFLD
EIGDMPLDIQTRLLRVLADGQFYRVGGHVAIKVDVRIVAATHQNLEKLVHQGKFREDLFHRLNVIRIHIPSLRERRQDIE
KLTKHFLALAAKELGVEMKTLNPRTVDILTKLDWPGNVRQLENMCRWLTVMASGSEVLPSDLPSELLSERKASHFDNDIS
WQKQLETWAKSALASGETELLAYALPEFERILLEAALHHTNGHKQEAAKVLGWGRNTLTRKLKELY

Nucleotide

• Length: 1401 bp

>NTDB_id=818262 R4535_RS12245 WP_000086389.1 2711343..2712743(+) (luxO) [Vibrio cholerae strain DL4211]
ATGAGTAGAGGATACGTCTGGGTTGTCGATGATGATAGTTCCATTCGCTGGGTAATGGAGAAAACGCTCTCTTCAGCCCA
TATAAAATGCGAAACCTTCGCAGATGCGGAAAGCGTACTGCTGGCACTGGAGCGTGAAACCCCCGACGTTCTTGTCTCAG
ATATTCGCATGCCAGGGATGGATGGCATTGCTCTGCTCAATCAAGTGCACCAACGCACCCCTGAACTTCCGGTGATCATT
ATGACCGCGCATTCGGATCTGGATGCCGCAGTCAATGCCTACCAACAAGGTGCCTTTGAGTATCTTCCCAAGCCTTTTGA
TGTCGATGAAACCCTCACCTTAGTCGAACGTGCCATCGCTCATGGTCAAGAGCAGCGCAAGACATCTCATCGTCCCAGTG
AAAACTATTCCGCCCCTGAAATCATTGGCGAAGCACCAGCTATGCAAGAAGTGTTTCGCGCGATTGGTCGCTTATCTCGC
TCTTCGATTTCGGTATTGATCAACGGTGAATCGGGAACCGGTAAAGAATTGGTCGCTCATGCTCTGCATAGACACAGTCC
TCGTGCCCAAAAGCCGTTTATTGCCCTCAACATGGCGGCAATTCCCAAAGATCTCATCGAATCTGAACTGTTTGGCCATG
AAAAAGGCGCGTTTACTGGTGCCAATACTGTGCGCCAAGGTCGCTTCGAACAAGCCAATGGCGGCACTTTATTTCTTGAT
GAAATTGGCGATATGCCGCTCGATATTCAAACTCGGTTATTGCGCGTGTTGGCGGATGGTCAGTTTTATCGCGTTGGCGG
TCATGTCGCGATAAAAGTCGATGTGCGAATCGTCGCAGCCACTCACCAAAATCTTGAAAAACTGGTTCATCAAGGCAAAT
TTCGTGAAGACTTATTCCATCGTCTGAACGTTATTCGCATCCATATCCCGTCACTGCGTGAACGTCGACAAGATATTGAA
AAGCTCACTAAGCACTTTTTAGCGCTGGCAGCCAAAGAGCTCGGAGTGGAGATGAAAACGCTCAACCCGCGCACCGTGGA
TATTCTGACCAAGCTCGATTGGCCGGGTAACGTGCGCCAACTCGAAAACATGTGTCGCTGGCTCACGGTGATGGCAAGTG
GAAGTGAAGTGCTGCCAAGTGATCTTCCTTCCGAATTATTATCAGAAAGGAAAGCCAGCCATTTTGATAATGATATAAGT
TGGCAGAAACAGTTAGAAACATGGGCAAAATCTGCACTGGCCTCCGGTGAAACCGAGTTGCTTGCCTACGCACTCCCAGA
ATTTGAACGTATACTTTTAGAAGCGGCACTTCACCACACCAATGGACATAAACAAGAAGCCGCCAAAGTATTGGGCTGGG
GACGGAATACGCTAACACGTAAACTCAAAGAGTTATATTAA

Domains

Predicted by InterProScan.

• Sigma-54 interaction domain (Sigma54_activat) (141-308)

• Bacterial regulatory protein, Fis family (HTH_8) (425-465)

• Response regulator receiver domain (Response_reg) (6-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	37.662	99.142	0.373
pilR	Pseudomonas aeruginosa PAK	37.419	99.785	0.373