Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | QAO32_RS00580 | Genome accession | NZ_CP123070 |
| Coordinates | 97070..97513 (+) | Length | 147 a.a. |
| NCBI ID | WP_001099009.1 | Uniprot ID | A0A0C6EXF8 |
| Organism | Staphylococcus aureus strain SW-MSSA64 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 88831..133259 | 97070..97513 | within | 0 |
Gene organization within MGE regions
Location: 88831..133259
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAO32_RS00500 (QAO32_00495) | - | 88831..89877 (-) | 1047 | WP_001145722.1 | tyrosine-type recombinase/integrase | - |
| QAO32_RS00505 (QAO32_00500) | - | 90088..90768 (-) | 681 | WP_000392109.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| QAO32_RS00510 (QAO32_00505) | - | 90800..91525 (-) | 726 | WP_053872064.1 | PH domain-containing protein | - |
| QAO32_RS00515 (QAO32_00510) | - | 91553..92227 (-) | 675 | WP_000775187.1 | ImmA/IrrE family metallo-endopeptidase | - |
| QAO32_RS00520 (QAO32_00515) | - | 92244..92576 (-) | 333 | WP_001055143.1 | helix-turn-helix domain-containing protein | - |
| QAO32_RS00525 (QAO32_00520) | - | 92839..93033 (+) | 195 | WP_015977910.1 | multiprotein-bridging factor 1 family protein | - |
| QAO32_RS00530 (QAO32_00525) | - | 93033..93800 (+) | 768 | WP_001002757.1 | phage antirepressor Ant | - |
| QAO32_RS00535 (QAO32_00530) | tscA | 93801..94025 (+) | 225 | WP_000187184.1 | type II toxin-antitoxin system antitoxin TscA | - |
| QAO32_RS00540 (QAO32_00535) | - | 94065..94514 (+) | 450 | WP_001094943.1 | hypothetical protein | - |
| QAO32_RS00545 (QAO32_00540) | - | 94528..94749 (+) | 222 | WP_000977381.1 | hypothetical protein | - |
| QAO32_RS00550 (QAO32_00545) | - | 94742..94903 (+) | 162 | WP_070852600.1 | DUF1270 family protein | - |
| QAO32_RS00555 (QAO32_00550) | - | 94996..95313 (+) | 318 | WP_000829612.1 | hypothetical protein | - |
| QAO32_RS00560 (QAO32_00555) | - | 95306..95608 (+) | 303 | WP_000163431.1 | DUF2482 family protein | - |
| QAO32_RS00565 (QAO32_00560) | - | 95613..95873 (+) | 261 | WP_000291481.1 | DUF1108 family protein | - |
| QAO32_RS00570 (QAO32_00565) | - | 95886..96422 (+) | 537 | WP_001004336.1 | host-nuclease inhibitor Gam family protein | - |
| QAO32_RS00575 (QAO32_00570) | - | 96423..97073 (+) | 651 | WP_000840496.1 | ERF family protein | - |
| QAO32_RS00580 (QAO32_00575) | ssbA | 97070..97513 (+) | 444 | WP_001099009.1 | single-stranded DNA-binding protein | Machinery gene |
| QAO32_RS00585 (QAO32_00580) | - | 97525..98199 (+) | 675 | WP_000057263.1 | putative HNHc nuclease | - |
| QAO32_RS00590 (QAO32_00585) | - | 98196..98345 (+) | 150 | WP_001081076.1 | hypothetical protein | - |
| QAO32_RS00595 (QAO32_00590) | - | 98338..98619 (-) | 282 | WP_000414755.1 | hypothetical protein | - |
| QAO32_RS00600 (QAO32_00595) | - | 98685..99455 (+) | 771 | WP_000190254.1 | conserved phage C-terminal domain-containing protein | - |
| QAO32_RS00605 (QAO32_00600) | - | 99465..100244 (+) | 780 | WP_000803062.1 | ATP-binding protein | - |
| QAO32_RS00610 (QAO32_00605) | - | 100238..100396 (+) | 159 | WP_000256589.1 | hypothetical protein | - |
| QAO32_RS00615 (QAO32_00610) | - | 100409..100630 (+) | 222 | WP_001123695.1 | DUF3269 family protein | - |
| QAO32_RS00620 (QAO32_00615) | - | 100640..101044 (+) | 405 | WP_000049795.1 | DUF1064 domain-containing protein | - |
| QAO32_RS00625 (QAO32_00620) | - | 101049..101234 (+) | 186 | WP_001187235.1 | DUF3113 family protein | - |
| QAO32_RS00630 (QAO32_00625) | - | 101235..101606 (+) | 372 | Protein_125 | SA1788 family PVL leukocidin-associated protein | - |
| QAO32_RS00635 (QAO32_00630) | - | 101607..101855 (+) | 249 | WP_015980409.1 | phi PVL orf 51-like protein | - |
| QAO32_RS00640 (QAO32_00635) | - | 101920..102369 (+) | 450 | WP_000982708.1 | YopX family protein | - |
| QAO32_RS00645 (QAO32_00640) | - | 102366..102731 (+) | 366 | WP_411905311.1 | acetyltransferase | - |
| QAO32_RS00650 (QAO32_00645) | - | 102724..102957 (+) | 234 | WP_053507579.1 | DUF1024 family protein | - |
| QAO32_RS00655 (QAO32_00650) | - | 102950..103486 (+) | 537 | WP_411905312.1 | dUTP diphosphatase | - |
| QAO32_RS00660 (QAO32_00655) | - | 103523..103699 (+) | 177 | Protein_131 | DUF1381 domain-containing protein | - |
| QAO32_RS00665 (QAO32_00660) | rinB | 103803..103952 (+) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| QAO32_RS00670 (QAO32_00665) | - | 103953..104318 (+) | 366 | WP_000455357.1 | hypothetical protein | - |
| QAO32_RS00675 (QAO32_00670) | - | 104319..104465 (+) | 147 | WP_176442183.1 | hypothetical protein | - |
| QAO32_RS00680 (QAO32_00675) | - | 104480..104899 (+) | 420 | WP_000058632.1 | transcriptional regulator | - |
| QAO32_RS00685 (QAO32_00680) | - | 105086..105526 (+) | 441 | WP_001003271.1 | terminase small subunit | - |
| QAO32_RS00690 (QAO32_00685) | - | 105513..106790 (+) | 1278 | WP_031769002.1 | PBSX family phage terminase large subunit | - |
| QAO32_RS00695 (QAO32_00690) | - | 106801..108336 (+) | 1536 | WP_015977939.1 | phage portal protein | - |
| QAO32_RS00700 (QAO32_00695) | - | 108343..109338 (+) | 996 | WP_001555735.1 | minor capsid protein | - |
| QAO32_RS00705 (QAO32_00700) | - | 109411..109581 (+) | 171 | WP_000072206.1 | hypothetical protein | - |
| QAO32_RS00710 (QAO32_00705) | - | 109609..109696 (+) | 88 | Protein_141 | hypothetical protein | - |
| QAO32_RS00715 (QAO32_00710) | - | 109690..110310 (+) | 621 | WP_000392140.1 | DUF4355 domain-containing protein | - |
| QAO32_RS00720 (QAO32_00715) | - | 110324..111298 (+) | 975 | WP_000438502.1 | phage major capsid protein | - |
| QAO32_RS00725 (QAO32_00720) | - | 111320..111607 (+) | 288 | WP_001114091.1 | hypothetical protein | - |
| QAO32_RS00730 (QAO32_00725) | - | 111616..111948 (+) | 333 | WP_000208960.1 | phage head-tail connector protein | - |
| QAO32_RS00735 (QAO32_00730) | - | 111945..112247 (+) | 303 | WP_001268312.1 | hypothetical protein | - |
| QAO32_RS00740 (QAO32_00735) | - | 112247..112594 (+) | 348 | WP_001017815.1 | HK97-gp10 family putative phage morphogenesis protein | - |
| QAO32_RS00745 (QAO32_00740) | - | 112606..112989 (+) | 384 | WP_000188649.1 | hypothetical protein | - |
| QAO32_RS00750 (QAO32_00745) | - | 113008..113589 (+) | 582 | WP_000002577.1 | phage major tail protein, TP901-1 family | - |
| QAO32_RS00755 (QAO32_00750) | - | 113651..114016 (+) | 366 | WP_001100163.1 | tail assembly chaperone | - |
| QAO32_RS00760 (QAO32_00755) | - | 114046..114390 (+) | 345 | WP_031928996.1 | hypothetical protein | - |
| QAO32_RS00765 (QAO32_00760) | - | 114407..117874 (+) | 3468 | WP_411905315.1 | hypothetical protein | - |
| QAO32_RS00770 (QAO32_00765) | - | 117887..118834 (+) | 948 | WP_000350680.1 | phage tail family protein | - |
| QAO32_RS00775 (QAO32_00770) | - | 118843..120744 (+) | 1902 | WP_000156404.1 | SGNH/GDSL hydrolase family protein | - |
| QAO32_RS00780 (QAO32_00775) | - | 120759..122669 (+) | 1911 | WP_031928995.1 | hypothetical protein | - |
| QAO32_RS00785 (QAO32_00780) | - | 122669..124492 (+) | 1824 | WP_015977938.1 | phage baseplate upper protein | - |
| QAO32_RS00790 (QAO32_00785) | - | 124492..124869 (+) | 378 | WP_000705888.1 | DUF2977 domain-containing protein | - |
| QAO32_RS00795 (QAO32_00790) | - | 124879..125052 (+) | 174 | WP_001790193.1 | XkdX family protein | - |
| QAO32_RS00800 (QAO32_00795) | - | 125093..125392 (+) | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| QAO32_RS00805 (QAO32_00800) | - | 125529..127427 (+) | 1899 | WP_000524007.1 | glucosaminidase domain-containing protein | - |
| QAO32_RS00810 (QAO32_00805) | - | 127440..128612 (+) | 1173 | WP_000276623.1 | BppU family phage baseplate upper protein | - |
| QAO32_RS00815 (QAO32_00810) | - | 128618..129013 (+) | 396 | WP_000398878.1 | hypothetical protein | - |
| QAO32_RS00820 (QAO32_00815) | - | 129069..129506 (+) | 438 | WP_000354132.1 | phage holin | - |
| QAO32_RS00825 (QAO32_00820) | - | 129487..130932 (+) | 1446 | WP_072541049.1 | SH3 domain-containing protein | - |
| QAO32_RS00830 (QAO32_00825) | - | 131175..131327 (+) | 153 | WP_001788502.1 | hypothetical protein | - |
| QAO32_RS00835 (QAO32_00830) | - | 131398..131508 (+) | 111 | WP_000139423.1 | hypothetical protein | - |
| QAO32_RS00840 (QAO32_00835) | - | 131510..131695 (+) | 186 | WP_001286805.1 | hypothetical protein | - |
| QAO32_RS00845 (QAO32_00840) | - | 132021..132122 (-) | 102 | WP_011447034.1 | hypothetical protein | - |
| QAO32_RS00850 (QAO32_00845) | - | 132449..132610 (+) | 162 | WP_001005407.1 | SE1561 family protein | - |
| QAO32_RS00855 (QAO32_00850) | - | 132744..133259 (+) | 516 | WP_000163283.1 | type 1 glutamine amidotransferase domain-containing protein | - |
Sequence
Protein
Download Length: 147 a.a. Molecular weight: 16321.89 Da Isoelectric Point: 5.8347
>NTDB_id=818112 QAO32_RS00580 WP_001099009.1 97070..97513(+) (ssbA) [Staphylococcus aureus strain SW-MSSA64]
MNTVNLIGNLVADPELKGQNNNVVNFVIAVQRPFKNKQTNEYETDFIRCVAFGKTAEIIANNFNKGNKIGVTGSIQTGSY
ENNQGQKVFTTDIAVNNITFVERKNNGQSNNQQQHNSYNAPQNRQQSNNPFANANGPIEISDDDLPF
MNTVNLIGNLVADPELKGQNNNVVNFVIAVQRPFKNKQTNEYETDFIRCVAFGKTAEIIANNFNKGNKIGVTGSIQTGSY
ENNQGQKVFTTDIAVNNITFVERKNNGQSNNQQQHNSYNAPQNRQQSNNPFANANGPIEISDDDLPF
Nucleotide
Download Length: 444 bp
>NTDB_id=818112 QAO32_RS00580 WP_001099009.1 97070..97513(+) (ssbA) [Staphylococcus aureus strain SW-MSSA64]
ATGAATACAGTAAATTTAATTGGGAACCTAGTGGCAGATCCAGAGTTAAAAGGTCAAAACAACAACGTAGTTAACTTTGT
AATCGCAGTACAGAGACCATTCAAAAACAAACAAACTAACGAATATGAAACAGACTTCATTCGTTGTGTTGCATTTGGTA
AGACTGCTGAAATCATCGCTAATAACTTTAATAAAGGTAATAAAATTGGCGTTACTGGTTCAATACAAACCGGTAGTTAT
GAAAATAATCAAGGACAGAAAGTGTTTACTACAGACATCGCAGTCAACAATATAACTTTCGTTGAACGTAAAAACAACGG
TCAATCTAACAACCAACAACAGCATAATTCATATAACGCACCACAGAATAGACAGCAATCAAATAATCCATTTGCTAATG
CTAATGGTCCTATAGAAATCTCTGACGATGATTTACCTTTCTAG
ATGAATACAGTAAATTTAATTGGGAACCTAGTGGCAGATCCAGAGTTAAAAGGTCAAAACAACAACGTAGTTAACTTTGT
AATCGCAGTACAGAGACCATTCAAAAACAAACAAACTAACGAATATGAAACAGACTTCATTCGTTGTGTTGCATTTGGTA
AGACTGCTGAAATCATCGCTAATAACTTTAATAAAGGTAATAAAATTGGCGTTACTGGTTCAATACAAACCGGTAGTTAT
GAAAATAATCAAGGACAGAAAGTGTTTACTACAGACATCGCAGTCAACAATATAACTTTCGTTGAACGTAAAAACAACGG
TCAATCTAACAACCAACAACAGCATAATTCATATAACGCACCACAGAATAGACAGCAATCAAATAATCCATTTGCTAATG
CTAATGGTCCTATAGAAATCTCTGACGATGATTTACCTTTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
41.279 |
100 |
0.483 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
38.235 |
100 |
0.442 |