Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   QEP67_RS06505 Genome accession   NZ_CP123058
Coordinates   1233827..1234621 (+) Length   264 a.a.
NCBI ID   WP_033658812.1    Uniprot ID   -
Organism   Bacillus cereus group sp. MS39     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1228827..1239621
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QEP67_RS06490 (QEP67_06485) argR 1229668..1230117 (+) 450 WP_001032581.1 arginine repressor ArgR -
  QEP67_RS06495 (QEP67_06490) recN 1230383..1232122 (+) 1740 WP_000947735.1 DNA repair protein RecN Machinery gene
  QEP67_RS06500 (QEP67_06495) spoIVB 1232241..1233539 (+) 1299 WP_002107735.1 SpoIVB peptidase -
  QEP67_RS06505 (QEP67_06500) spo0A 1233827..1234621 (+) 795 WP_033658812.1 sporulation transcription factor Spo0A Regulator
  QEP67_RS06510 (QEP67_06505) - 1234875..1235438 (+) 564 WP_074651143.1 PRK06770 family protein -
  QEP67_RS06515 (QEP67_06510) - 1235678..1235824 (-) 147 WP_001247671.1 YycC family protein -
  QEP67_RS06520 (QEP67_06515) - 1235875..1236603 (+) 729 WP_064459836.1 glycerophosphodiester phosphodiesterase -
  QEP67_RS06525 (QEP67_06520) - 1236652..1236885 (-) 234 WP_001190196.1 DUF2627 domain-containing protein -
  QEP67_RS06530 (QEP67_06525) - 1237022..1239094 (+) 2073 WP_048565700.1 sigma-54-dependent Fis family transcriptional regulator -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29390.02 Da        Isoelectric Point: 6.7576

>NTDB_id=818037 QEP67_RS06505 WP_033658812.1 1233827..1234621(+) (spo0A) [Bacillus cereus group sp. MS39]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLNDKQPDVLVLDIIMPHLDGLAVLEKMRNIERLRQP
SVIMLTAFGQEDVTTKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=818037 QEP67_RS06505 WP_033658812.1 1233827..1234621(+) (spo0A) [Bacillus cereus group sp. MS39]
GTGGAGAAAATTAAAGTCTGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTACGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAATGATAAGCAGCCGGATGTACTTG
TTTTAGACATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGAAATATTGAAAGGCTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGACAAGAAGATGTGACGACAAAAGCAGTTGACTTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAGGCGAACGCTACCATTAAACGTCCAC
TTCCATCTTTCCGTTCAGCAACTACAATAGATGGAAAACCGAAAAACTTAGACGCGAGCATTACGAGTATCATTCATGAA
ATCGGTGTACCTGCTCATATTAAAGGGTATATGTACTTAAGGGAAGCAATCTCTATGGTGTACAATGATATCGAATTACT
TGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGCCGCGTCGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCCGAGTTCATCGCTATGGTTGCGGATAAGCTTAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.15

100

0.811