Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   QEP67_RS06495 Genome accession   NZ_CP123058
Coordinates   1230383..1232122 (+) Length   579 a.a.
NCBI ID   WP_000947735.1    Uniprot ID   A0A2C4ZIL7
Organism   Bacillus cereus group sp. MS39     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1225383..1237122
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QEP67_RS06475 (QEP67_06470) ispA 1225596..1226486 (+) 891 WP_000150358.1 (2E,6E)-farnesyl diphosphate synthase -
  QEP67_RS06480 (QEP67_06475) dxs 1226790..1228682 (+) 1893 WP_000366437.1 1-deoxy-D-xylulose-5-phosphate synthase -
  QEP67_RS06485 (QEP67_06480) - 1228686..1229525 (+) 840 WP_001274750.1 TlyA family RNA methyltransferase -
  QEP67_RS06490 (QEP67_06485) argR 1229668..1230117 (+) 450 WP_001032581.1 arginine repressor ArgR -
  QEP67_RS06495 (QEP67_06490) recN 1230383..1232122 (+) 1740 WP_000947735.1 DNA repair protein RecN Machinery gene
  QEP67_RS06500 (QEP67_06495) spoIVB 1232241..1233539 (+) 1299 WP_002107735.1 SpoIVB peptidase -
  QEP67_RS06505 (QEP67_06500) spo0A 1233827..1234621 (+) 795 WP_033658812.1 sporulation transcription factor Spo0A Regulator
  QEP67_RS06510 (QEP67_06505) - 1234875..1235438 (+) 564 WP_074651143.1 PRK06770 family protein -
  QEP67_RS06515 (QEP67_06510) - 1235678..1235824 (-) 147 WP_001247671.1 YycC family protein -
  QEP67_RS06520 (QEP67_06515) - 1235875..1236603 (+) 729 WP_064459836.1 glycerophosphodiester phosphodiesterase -
  QEP67_RS06525 (QEP67_06520) - 1236652..1236885 (-) 234 WP_001190196.1 DUF2627 domain-containing protein -

Sequence

Protein


Download         Length: 579 a.a.        Molecular weight: 65695.79 Da        Isoelectric Point: 4.8574

>NTDB_id=818036 QEP67_RS06495 WP_000947735.1 1230383..1232122(+) (recN) [Bacillus cereus group sp. MS39]
MLSELSIRNFAIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGGRGSAEFVRYGTEKAEIEGLFYVEDDKHPCIEK
AEELDIEIEDGMIILKRDIAANGKSVCRVNGKLVTLSILKEIGKTLVDIHGQHETQDLMNEERHLFMLDHFDGDRIVKQL
GIYQNVYADYEKLKKQLKSLSENEQQMAHRLDLIQFQHEEISKADLKMDEEIELTEERLRISNFEKIYKALGDAYRSLSA
DGQGLDNVRSAMGQMESITHLDEVYQENHDSIANSYYLLEEVAYQLREKLDMMEYDPKRLDEIETRLNEIRMLKRKYGNT
VEEILAYADKIEQEIFTIENKDVHIETTKKQLKELESVILQEATSLSNMRHELAEHLTNAIHQELKELYMEKTKFEVRIM
KREGNAEEPLVEGAPVRLTADGYDHVEFYISTNPGEPLKPLSKVASGGELSRIILALKSIFSKHQGVASVIFDEVDTGVS
GRVAQAIAEKIYRVSVNSQVLCITHLPQVASMADSHLFIRKQVANDRTITSVTVLTMEDKVTEIARMISGVEITDLTTEH
AKELLTQAHHFKQTAEAIQ

Nucleotide


Download         Length: 1740 bp        

>NTDB_id=818036 QEP67_RS06495 WP_000947735.1 1230383..1232122(+) (recN) [Bacillus cereus group sp. MS39]
TTGTTATCGGAATTATCGATTAGAAACTTTGCTATTATTGAGGCATTAAATATTTCTTTTCAAAAAGGGTTAACGGTTTT
AAGTGGTGAAACAGGGGCCGGAAAATCGATTATTATTGATGCGATTAGTTTACTTGTAGGTGGCCGTGGTTCAGCGGAAT
TTGTTCGATACGGAACAGAAAAAGCTGAGATAGAAGGGCTATTTTATGTAGAAGATGATAAGCATCCGTGTATTGAAAAG
GCAGAAGAGTTGGATATAGAAATAGAAGACGGCATGATTATTTTGAAGCGTGATATCGCTGCAAACGGAAAAAGTGTATG
TCGTGTAAATGGGAAACTGGTCACCCTTAGTATATTAAAGGAAATTGGAAAAACACTTGTTGATATTCATGGGCAGCACG
AAACACAAGATTTAATGAATGAAGAGCGTCATCTATTTATGCTTGATCATTTTGATGGAGATCGCATTGTTAAACAATTG
GGTATATATCAAAATGTATACGCTGACTATGAGAAATTAAAAAAACAGTTAAAATCGTTAAGTGAAAATGAACAACAAAT
GGCGCATCGCTTAGATTTAATTCAATTCCAGCATGAAGAAATCAGTAAGGCGGATTTAAAGATGGATGAAGAAATTGAAT
TAACTGAAGAACGATTGCGAATTTCTAATTTTGAAAAAATTTATAAAGCATTAGGCGATGCATATCGCTCATTAAGCGCT
GACGGACAAGGGTTAGATAATGTACGAAGCGCAATGGGACAAATGGAGAGTATTACACATTTAGATGAAGTTTATCAAGA
AAATCATGATTCAATTGCAAATAGCTACTACTTATTAGAAGAAGTTGCATATCAACTTAGAGAAAAGCTCGATATGATGG
AATATGATCCGAAGCGTTTAGACGAAATTGAAACGCGTTTAAATGAAATTCGTATGCTAAAGAGAAAATATGGAAATACT
GTAGAAGAGATTTTAGCGTATGCTGATAAAATTGAACAAGAAATTTTTACGATTGAAAATAAAGACGTTCATATTGAAAC
GACGAAGAAGCAATTAAAGGAATTAGAAAGTGTTATTCTGCAAGAAGCAACGTCGTTAAGTAATATGCGTCATGAGCTTG
CAGAGCATCTTACAAATGCCATTCATCAGGAATTAAAAGAATTATATATGGAGAAAACAAAATTTGAAGTGAGAATCATG
AAGAGAGAAGGAAATGCTGAAGAGCCTCTTGTTGAGGGTGCCCCGGTAAGACTTACGGCGGATGGCTACGATCATGTGGA
ATTTTATATTTCAACAAATCCAGGTGAGCCGCTAAAACCACTTTCAAAGGTCGCTTCTGGCGGAGAGTTATCTCGTATTA
TTTTAGCTTTAAAAAGCATTTTTTCTAAGCATCAAGGTGTTGCATCTGTTATTTTTGATGAAGTGGATACTGGTGTAAGT
GGTCGGGTTGCACAGGCTATTGCGGAAAAAATTTATCGAGTATCAGTAAACTCGCAAGTACTTTGTATTACGCACTTACC
TCAAGTAGCTTCAATGGCGGATTCACATTTATTTATTCGAAAACAAGTAGCGAATGATCGGACAATTACATCAGTTACCG
TTTTAACTATGGAGGATAAAGTAACAGAAATAGCTCGAATGATTTCTGGTGTGGAAATTACAGATTTAACGACAGAACAT
GCGAAAGAATTACTTACGCAAGCGCATCATTTTAAACAGACAGCAGAGGCTATCCAGTAA

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-521)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2C4ZIL7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

59.931

100

0.599