Detailed information NTG0081781

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: R8563_RS10740
• Genome accession: NZ_AP026917
• Coordinates: 2063725..2064822 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266666.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700007
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2058725..2069822

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8563_RS10715 (PC0007_20610)	pgsA	2059246..2059791 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
R8563_RS10720 (PC0007_20620)	rodZ	2059802..2060623 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
R8563_RS10725 (PC0007_20630)	yfmH	2060665..2061948 (-)	1284	WP_000170217.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
R8563_RS10730 (PC0007_20640)	yfmF	2061945..2063195 (-)	1251	WP_000424271.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
R8563_RS10735 (PC0007_20650)	yaaA	2063354..2063722 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
R8563_RS10740 (PC0007_20660)	recF	2063725..2064822 (+)	1098	WP_000266666.1	DNA replication/repair protein RecF	Machinery gene
R8563_RS10745 (PC0007_20670)	guaB	2064873..2066351 (-)	1479	WP_000073424.1	IMP dehydrogenase	-
R8563_RS10750 (PC0007_20680)	trpS	2066503..2067528 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
R8563_RS10755 (PC0007_20690)	-	2067734..2069356 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41915.99 Da
• Isoelectric Point: 8.6711

>NTDB_id=81781 R8563_RS10740 WP_000266666.1 2063725..2064822(+) (recF) [Streptococcus pneumoniae strain PZ900700007]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSDQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSKSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=81781 R8563_RS10740 WP_000266666.1 2063725..2064822(+) (recF) [Streptococcus pneumoniae strain PZ900700007]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATCGATATGGAACTTGGGCAAATTAAGCCAATCTACTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGATCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAAATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCTATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAA
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTACC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.178	100	0.992
recF	Bacillus subtilis subsp. subtilis str. 168	45.628	100	0.458