Detailed information NTG0817567

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: R3L13_RS13045
• Genome accession: NZ_CP137055
• Coordinates: 2717799..2719112 (+)
• Length: 437 a.a.
• NCBI ID: WP_001289250.1
• Uniprot ID: A3M1Y8
• Organism: Acinetobacter baumannii strain SNUBHAB0137
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2712799..2724112

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R3L13_RS13030 (R3L13_13055)	-	2712919..2715150 (-)	2232	WP_005135841.1	TonB-dependent siderophore receptor	-
R3L13_RS13035 (R3L13_13060)	tig	2715565..2716899 (+)	1335	WP_001198432.1	trigger factor	-
R3L13_RS13040 (R3L13_13065)	clpP	2717092..2717697 (+)	606	WP_000289452.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	-
R3L13_RS13045 (R3L13_13070)	clpX	2717799..2719112 (+)	1314	WP_001289250.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
R3L13_RS13050 (R3L13_13075)	-	2719260..2719976 (+)	717	WP_002058680.1	DUF2846 domain-containing protein	-
R3L13_RS13055 (R3L13_13080)	-	2720001..2720555 (-)	555	WP_114258756.1	DUF2059 domain-containing protein	-
R3L13_RS13060 (R3L13_13085)	-	2720697..2722223 (-)	1527	WP_114258757.1	fumarate hydratase	-
R3L13_RS13065 (R3L13_13090)	-	2722336..2723544 (-)	1209	WP_000343018.1	IS256-like element ISAba26 family transposase	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 48082.87 Da
• Isoelectric Point: 4.9985

>NTDB_id=817567 R3L13_RS13045 WP_001289250.1 2717799..2719112(+) (clpX) [Acinetobacter baumannii strain SNUBHAB0137]
MSEHPQGQKHCSFCGKTQSEVGKLIAGEDAYICNECVDVCLDLVQTSQQVEAGDWASKALPKPHEIRAALDQYVIGQDLA
KKTLSVAVYNHYKRLKVGQSGHVSKDVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENI
VQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGGRKHPQQEFIQIDTS
NILFICGGAFAGLEKIVQQRQEKGGIGFTADVKNKDETKKLAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEAL
MQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDLPSRTDVGTVFINEAV
INGEAEPVYKSERQPKEAVTHESVAKADLKVIDSKSA

Nucleotide

• Length: 1314 bp

>NTDB_id=817567 R3L13_RS13045 WP_001289250.1 2717799..2719112(+) (clpX) [Acinetobacter baumannii strain SNUBHAB0137]
ATGTCCGAACATCCTCAAGGACAAAAACATTGTTCATTTTGCGGTAAAACGCAGTCTGAAGTCGGGAAACTGATTGCGGG
CGAGGACGCATATATTTGTAATGAGTGTGTAGATGTCTGCTTAGACCTTGTACAAACCAGCCAACAGGTTGAAGCAGGTG
ACTGGGCGAGCAAGGCATTGCCAAAACCACATGAAATACGTGCTGCGCTTGATCAATATGTAATTGGTCAGGATCTTGCC
AAAAAGACATTATCTGTTGCCGTTTATAACCATTATAAGCGTTTGAAAGTCGGGCAATCTGGTCATGTGTCTAAAGATGT
GGAAATTGCTAAAAGTAACATTCTACTGATTGGGCCTACTGGTTCAGGTAAAACATTACTTGCTCAAACATTGGCTCGTT
TGTTAGATGTGCCGTTTGCAATGGCAGATGCGACTACTTTGACTGAAGCGGGTTATGTTGGCGAAGACGTTGAAAATATC
GTACAAAAACTTTTGCAAAAAGCAGATTACGATGTAGAAAAAGCTCAAAAGGGCATTATTTATATCGATGAAATCGACAA
GATTACACGTAAATCTGAAAATCCGTCGATTACTCGTGACGTGTCTGGTGAAGGTGTACAACAAGCTTTGCTTAAGATGA
TTGAAGGTACTGTAGCTTCAATTCCACCACAAGGTGGACGTAAGCATCCGCAGCAAGAGTTCATTCAAATTGATACCTCA
AATATTCTATTTATTTGTGGTGGTGCATTTGCTGGACTGGAAAAAATTGTACAACAGCGTCAAGAGAAAGGTGGAATTGG
CTTTACGGCTGATGTTAAAAACAAAGATGAAACCAAAAAACTTGCTGAATTATTCCGTCAAGTTGAGCCAACTGATTTAG
TTAAATTTGGTTTAATTCCAGAATTCATTGGCCGTTTACCAGTGATTGCAACGCTTGAAGAGCTTGATGAAGAAGCGTTA
ATGCAAATTTTGACTGAACCGAAAAATGCATTAACTCGTCAGTATCAATACCTGTTCAATATGGAAAATGTTGACCTCGT
ATTTGAAGATTCAGCTTTACGTGCAGTGGCTAAGCGTGCGCTTGAGCGTAATACCGGAGCTCGTGGCCTACGTTCGATTT
TGGAAAATGTTCTACTTGAAACGATGTATGACTTGCCAAGCCGTACAGATGTAGGAACAGTTTTCATTAATGAAGCAGTT
ATTAATGGTGAAGCTGAGCCTGTCTACAAGTCAGAACGTCAGCCTAAAGAAGCTGTAACTCATGAAAGTGTTGCCAAGGC
AGATTTAAAAGTAATTGATTCGAAGTCTGCTTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (315-390)

• ClpX C4-type zinc finger (zf-C4_ClpX) (9-45)

• AAA domain (Cdc48 subfamily) (AAA_2) (111-309)

3D structure

• AlphaFold DB: A3M1Y8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	59.453	91.991	0.547
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.426	92.449	0.531