Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | QAP07_RS00280 | Genome accession | NZ_CP122946 |
| Coordinates | 63141..63716 (+) | Length | 191 a.a. |
| NCBI ID | WP_286444592.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain BS31 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 58141..68716
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAP07_RS00255 (QAP07_00255) | uvrD | 58832..60877 (+) | 2046 | WP_286444589.1 | DNA helicase UvrD | - |
| QAP07_RS00260 (QAP07_00260) | flgA | 60874..61530 (+) | 657 | WP_286444590.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| QAP07_RS00265 (QAP07_00265) | - | 61540..62103 (+) | 564 | WP_000780124.1 | UbiX family flavin prenyltransferase | - |
| QAP07_RS00270 (QAP07_00270) | coaD | 62103..62576 (+) | 474 | WP_001169259.1 | pantetheine-phosphate adenylyltransferase | - |
| QAP07_RS00275 (QAP07_00275) | tmk | 62578..63153 (+) | 576 | WP_286444591.1 | dTMP kinase | - |
| QAP07_RS00280 (QAP07_00280) | comFC | 63141..63716 (+) | 576 | WP_286444592.1 | ComF family protein | Machinery gene |
| QAP07_RS00285 (QAP07_00285) | - | 63749..65788 (+) | 2040 | WP_286444593.1 | N-6 DNA methylase | - |
| QAP07_RS00290 (QAP07_00290) | - | 65785..67031 (+) | 1247 | Protein_56 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21355.99 Da Isoelectric Point: 8.7493
>NTDB_id=817264 QAP07_RS00280 WP_286444592.1 63141..63716(+) (comFC) [Helicobacter pylori strain BS31]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAVLLKGFCQGNLKPTYGCLRATNTISYAGKSLEFRTNNPRNFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCNADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAVLLKGFCQGNLKPTYGCLRATNTISYAGKSLEFRTNNPRNFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCNADE
Nucleotide
Download Length: 576 bp
>NTDB_id=817264 QAP07_RS00280 WP_286444592.1 63141..63716(+) (comFC) [Helicobacter pylori strain BS31]
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CACTAATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGTGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTATGGGTGTTTAAGGGCTACTAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCACCAATAACCCACGGAATTTCACCTTCAAGGGCGATGAAACTTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCACACTTTGCAATCGCACTTTG
CAACGCAGATGAATGA
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CACTAATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGTGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTATGGGTGTTTAAGGGCTACTAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCACCAATAACCCACGGAATTTCACCTTCAAGGGCGATGAAACTTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCACACTTTGCAATCGCACTTTG
CAACGCAGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
93.717 |
100 |
0.937 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.979 |
100 |
0.372 |