Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   R3H61_RS02195 Genome accession   NZ_CP136951
Coordinates   425423..426457 (+) Length   344 a.a.
NCBI ID   WP_136038773.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Spyo09     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 420423..431457
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R3H61_RS02165 (R3H61_02165) tsaE 421497..421958 (+) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  R3H61_RS02170 (R3H61_02170) - 421933..422457 (+) 525 WP_063811834.1 GNAT family N-acetyltransferase -
  R3H61_RS02175 (R3H61_02175) brpA 422466..423740 (+) 1275 WP_129284299.1 biofilm formation/cell division transcriptional regulator BrpA -
  R3H61_RS02180 (R3H61_02180) - 423851..424207 (-) 357 WP_129284300.1 chemotaxis protein -
  R3H61_RS02185 (R3H61_02185) - 424204..424623 (-) 420 WP_002983376.1 HIT family protein -
  R3H61_RS02190 (R3H61_02190) pptA 424695..425420 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  R3H61_RS02195 (R3H61_02195) pptB 425423..426457 (+) 1035 WP_136038773.1 ABC transporter permease Regulator
  R3H61_RS02200 (R3H61_02200) ccrZ 426521..427312 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  R3H61_RS02205 (R3H61_02205) trmB 427312..427947 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  R3H61_RS02215 (R3H61_02215) rimP 428206..428742 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  R3H61_RS02220 (R3H61_02220) nusA 428917..430074 (+) 1158 WP_002983485.1 transcription termination factor NusA -
  R3H61_RS02225 (R3H61_02225) rnpM 430090..430386 (+) 297 WP_002983486.1 RNase P modulator RnpM -
  R3H61_RS02230 (R3H61_02230) - 430379..430681 (+) 303 WP_136285357.1 YlxQ-related RNA-binding protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40230.46 Da        Isoelectric Point: 10.3713

>NTDB_id=816620 R3H61_RS02195 WP_136038773.1 425423..426457(+) (pptB) [Streptococcus pyogenes strain Spyo09]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFVLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERAYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=816620 R3H61_RS02195 WP_136038773.1 425423..426457(+) (pptB) [Streptococcus pyogenes strain Spyo09]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTGTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTACTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAGCTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus salivarius strain HSISS4

43.023

100

0.43

  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43