Detailed information NTG0081658

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: R8522_RS11155
• Genome accession: NZ_AP026916
• Coordinates: 2169115..2170212 (-)
• Length: 365 a.a.
• NCBI ID: WP_000266660.1
• Uniprot ID: Q97N44
• Organism: Streptococcus pneumoniae strain PZ900700006
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2164115..2175212

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8522_RS11140 (PC0006_22060)	-	2164581..2166203 (-)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-
R8522_RS11145 (PC0006_22070)	trpS	2166409..2167434 (+)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
R8522_RS11150 (PC0006_22080)	guaB	2167586..2169064 (+)	1479	WP_000073428.1	IMP dehydrogenase	-
R8522_RS11155 (PC0006_22090)	recF	2169115..2170212 (-)	1098	WP_000266660.1	DNA replication/repair protein RecF	Machinery gene
R8522_RS11160 (PC0006_22100)	-	2170215..2170583 (-)	369	WP_000455898.1	RNA-binding S4 domain-containing protein	-
R8522_RS11165 (PC0006_22110)	yfmF	2170742..2171992 (+)	1251	WP_000424261.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
R8522_RS11170 (PC0006_22120)	yfmH	2171989..2173272 (+)	1284	WP_050123495.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
R8522_RS11175 (PC0006_22130)	rodZ	2173314..2174135 (+)	822	WP_001227958.1	cytoskeleton protein RodZ	-
R8522_RS11180 (PC0006_22140)	pgsA	2174146..2174691 (+)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41900.00 Da
• Isoelectric Point: 9.0596

>NTDB_id=81658 R8522_RS11155 WP_000266660.1 2169115..2170212(-) (recF) [Streptococcus pneumoniae strain PZ900700006]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=81658 R8522_RS11155 WP_000266660.1 2169115..2170212(-) (recF) [Streptococcus pneumoniae strain PZ900700006]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCTATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACCAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q97N44

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.726	100	0.997
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46