Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   RJD36_RS02125 Genome accession   NZ_CP136943
Coordinates   385295..386029 (+) Length   244 a.a.
NCBI ID   WP_003063479.1    Uniprot ID   A0A0W7V3J5
Organism   Streptococcus pasteurianus strain WUSP082     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 380295..391029
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RJD36_RS02100 (RJD36_02100) - 380410..380709 (+) 300 WP_003063470.1 PTS sugar transporter subunit IIB -
  RJD36_RS02105 (RJD36_02105) - 380737..382095 (+) 1359 WP_069789217.1 PTS ascorbate transporter subunit IIC -
  RJD36_RS02110 (RJD36_02110) fsa 382109..382762 (+) 654 WP_003063474.1 fructose-6-phosphate aldolase -
  RJD36_RS02115 (RJD36_02115) recP/tkt 382852..384837 (+) 1986 WP_069789213.1 transketolase Machinery gene
  RJD36_RS02120 (RJD36_02120) - 384978..385292 (+) 315 WP_117479670.1 bacteriocin immunity protein -
  RJD36_RS02125 (RJD36_02125) pptA 385295..386029 (+) 735 WP_003063479.1 ABC transporter ATP-binding protein Regulator
  RJD36_RS02130 (RJD36_02130) - 386034..387659 (+) 1626 WP_317751409.1 ABC transporter permease -
  RJD36_RS02135 (RJD36_02135) proB 387761..388564 (+) 804 WP_041974199.1 glutamate 5-kinase -
  RJD36_RS02140 (RJD36_02140) - 388579..389829 (+) 1251 WP_058692754.1 glutamate-5-semialdehyde dehydrogenase -
  RJD36_RS02145 (RJD36_02145) rsmH 389980..390930 (+) 951 WP_287179920.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 27380.17 Da        Isoelectric Point: 4.5138

>NTDB_id=816307 RJD36_RS02125 WP_003063479.1 385295..386029(+) (pptA) [Streptococcus pasteurianus strain WUSP082]
MIRFDHVSKLYGDKEALSDVNMTIANGEIFGLIGHNGAGKTTTISILTSIIEASYGEVYVDELPLSEHRDDIKKRIGYVP
DSPDIFLNLTAIEYWHFLAKIYDVDDKLTDERIERLSHLFDIAENINDLIDSFSHGMRQKVILIGALISNPDIWILDEPL
TGLDPQASFDLKEMMKEHARGGNTVLFSTHVLAVAEQLCDRIGILKDGKLIFIGTLDELKANHPDKDLETIYLELAGRKA
QEEG

Nucleotide


Download         Length: 735 bp        

>NTDB_id=816307 RJD36_RS02125 WP_003063479.1 385295..386029(+) (pptA) [Streptococcus pasteurianus strain WUSP082]
ATGATTCGATTTGATCATGTTTCAAAGTTGTATGGTGATAAGGAAGCGCTAAGTGATGTCAATATGACCATTGCTAATGG
CGAAATTTTTGGCTTGATTGGGCATAATGGTGCAGGAAAAACAACGACGATTAGCATTTTAACGTCAATCATTGAAGCGA
GCTATGGTGAGGTATATGTTGATGAGTTACCTCTTTCTGAGCACCGTGATGATATCAAAAAACGCATTGGTTATGTGCCT
GATTCACCTGATATTTTCCTGAATTTGACGGCGATAGAATACTGGCATTTTTTAGCTAAAATTTATGACGTTGATGATAA
GCTCACTGATGAACGGATTGAACGATTGTCACATTTGTTTGATATTGCGGAGAATATCAATGATTTGATTGATAGTTTTT
CACACGGTATGCGTCAAAAAGTGATTCTTATTGGTGCTCTGATATCAAATCCAGATATTTGGATTTTAGATGAACCTTTG
ACAGGACTTGACCCACAGGCATCTTTTGATTTGAAAGAAATGATGAAAGAGCACGCGCGTGGTGGCAATACGGTTCTTTT
CTCAACACATGTTCTTGCTGTTGCGGAGCAACTTTGTGACCGTATTGGAATTTTAAAAGATGGCAAGTTGATTTTTATCG
GCACCTTAGATGAATTGAAAGCTAATCATCCTGATAAAGATTTAGAAACAATCTATCTTGAATTAGCAGGGCGTAAAGCG
CAAGAGGAGGGCTAG

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0W7V3J5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

36.975

97.541

0.361
  pptA Streptococcus salivarius strain HSISS4

36.975

97.541

0.361