Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | QAO16_RS14895 | Genome accession | NZ_CP122489 |
| Coordinates | 2963937..2964407 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934764.1 | Uniprot ID | A0A9P4DKA4 |
| Organism | Staphylococcus aureus strain GE-MSSA42 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2958937..2969407
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAO16_RS14855 (QAO16_14840) | - | 2958952..2959272 (+) | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| QAO16_RS14860 (QAO16_14845) | - | 2959269..2959430 (+) | 162 | WP_000066017.1 | DUF1270 domain-containing protein | - |
| QAO16_RS14865 (QAO16_14850) | - | 2959525..2959851 (+) | 327 | WP_000165375.1 | DUF2482 family protein | - |
| QAO16_RS14870 (QAO16_14855) | - | 2959832..2960092 (+) | 261 | WP_000291503.1 | DUF1108 family protein | - |
| QAO16_RS14875 (QAO16_14860) | - | 2960101..2960364 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| QAO16_RS14880 (QAO16_14865) | - | 2960373..2962316 (+) | 1944 | WP_000700577.1 | AAA family ATPase | - |
| QAO16_RS14885 (QAO16_14870) | - | 2962318..2963238 (+) | 921 | WP_000138472.1 | recombinase RecT | - |
| QAO16_RS14890 (QAO16_14875) | - | 2963319..2963936 (+) | 618 | WP_071621397.1 | MBL fold metallo-hydrolase | - |
| QAO16_RS14895 (QAO16_14880) | ssbA | 2963937..2964407 (+) | 471 | WP_000934764.1 | single-stranded DNA-binding protein | Machinery gene |
| QAO16_RS14900 (QAO16_14885) | - | 2964437..2965321 (+) | 885 | WP_000148316.1 | DnaD domain protein | - |
| QAO16_RS14905 (QAO16_14890) | - | 2965328..2965546 (+) | 219 | WP_000338531.1 | hypothetical protein | - |
| QAO16_RS14910 (QAO16_14895) | - | 2965555..2965864 (+) | 310 | Protein_2900 | RusA family crossover junction endodeoxyribonuclease | - |
| QAO16_RS14915 (QAO16_14900) | - | 2965877..2966245 (+) | 369 | WP_000101274.1 | SA1788 family PVL leukocidin-associated protein | - |
| QAO16_RS14920 (QAO16_14905) | - | 2966249..2966491 (+) | 243 | WP_000131366.1 | SAV1978 family virulence-associated passenger protein | - |
| QAO16_RS14925 (QAO16_14910) | - | 2966503..2966670 (+) | 168 | WP_001624242.1 | hypothetical protein | - |
| QAO16_RS14930 (QAO16_14915) | - | 2966663..2966914 (+) | 252 | WP_001065091.1 | DUF1024 family protein | - |
| QAO16_RS14935 (QAO16_14920) | - | 2966904..2967086 (+) | 183 | WP_000028422.1 | hypothetical protein | - |
| QAO16_RS14940 (QAO16_14925) | - | 2967079..2967621 (+) | 543 | WP_000185659.1 | dUTP diphosphatase | - |
| QAO16_RS14945 (QAO16_14930) | - | 2967658..2967864 (+) | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| QAO16_RS14950 (QAO16_14935) | - | 2967861..2968247 (+) | 387 | WP_000592207.1 | hypothetical protein | - |
| QAO16_RS14955 (QAO16_14940) | rinB | 2968244..2968393 (+) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| QAO16_RS14960 (QAO16_14945) | - | 2968393..2968593 (+) | 201 | WP_000265043.1 | DUF1514 family protein | - |
| QAO16_RS14965 (QAO16_14950) | - | 2968621..2969037 (+) | 417 | WP_000590122.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17627.49 Da Isoelectric Point: 5.2672
>NTDB_id=816035 QAO16_RS14895 WP_000934764.1 2963937..2964407(+) (ssbA) [Staphylococcus aureus strain GE-MSSA42]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVVADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVVADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=816035 QAO16_RS14895 WP_000934764.1 2963937..2964407(+) (ssbA) [Staphylococcus aureus strain GE-MSSA42]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTGTTGCCGATAGTATTCAATTTTTAGAACCGAAGAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTGA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTGTTGCCGATAGTATTCAATTTTTAGAACCGAAGAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
51.176 |
100 |
0.558 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Neisseria meningitidis MC58 |
33.526 |
100 |
0.372 |
| ssb | Neisseria gonorrhoeae MS11 |
33.526 |
100 |
0.372 |
| ssb | Glaesserella parasuis strain SC1401 |
32.768 |
100 |
0.372 |
| ssb | Vibrio cholerae strain A1552 |
31.492 |
100 |
0.365 |