Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   QAY59_RS05200 Genome accession   NZ_CP122487
Coordinates   1057058..1057681 (-) Length   207 a.a.
NCBI ID   WP_258390365.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IT-MRSA45     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1052058..1062681
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAY59_RS05180 (QAY59_05170) rpsT 1052972..1053223 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  QAY59_RS05185 (QAY59_05175) holA 1053268..1054242 (-) 975 WP_001282568.1 DNA polymerase III subunit delta -
  QAY59_RS05190 (QAY59_05180) comEC 1054299..1056500 (-) 2202 WP_001566670.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  QAY59_RS05195 (QAY59_05185) - 1056505..1056966 (-) 462 WP_000439693.1 ComE operon protein 2 -
  QAY59_RS05200 (QAY59_05190) comEA 1057058..1057681 (-) 624 WP_258390365.1 ComEA family DNA-binding protein Machinery gene
  QAY59_RS05205 (QAY59_05195) - 1057784..1058500 (-) 717 WP_000084829.1 class I SAM-dependent DNA methyltransferase -
  QAY59_RS05210 (QAY59_05200) rsfS 1058503..1058856 (-) 354 WP_001088022.1 ribosome silencing factor -
  QAY59_RS05215 (QAY59_05205) yqeK 1058857..1059441 (-) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  QAY59_RS05220 (QAY59_05210) nadD 1059431..1060000 (-) 570 WP_000725167.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  QAY59_RS05225 (QAY59_05215) yhbY 1060003..1060293 (-) 291 WP_000955235.1 ribosome assembly RNA-binding protein YhbY -
  QAY59_RS05230 (QAY59_05220) aroE 1060297..1061103 (-) 807 WP_000666748.1 shikimate dehydrogenase -
  QAY59_RS05235 (QAY59_05225) yqeH 1061117..1062217 (-) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23040.17 Da        Isoelectric Point: 9.4671

>NTDB_id=815931 QAY59_RS05200 WP_258390365.1 1057058..1057681(-) (comEA) [Staphylococcus aureus strain IT-MRSA45]
MISAVVLIMVLIGFIFWRQDDYTSRNFENKDNALKQSTSENSSLSKVEDVQVKDGDNSKNKGPVYVDVKGAVKHPNVYKM
TSKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIGVNSVHVKNGNTNNTKVNLNTASVSELMSV
PGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTI

Nucleotide


Download         Length: 624 bp        

>NTDB_id=815931 QAY59_RS05200 WP_258390365.1 1057058..1057681(-) (comEA) [Staphylococcus aureus strain IT-MRSA45]
ATTATAAGTGCTGTTGTTTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTT
TGAAAATAAAGATAATGCTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAAGTAGAAGATGTCCAGGTCAAAG
ATGGAGATAATTCCAAAAATAAGGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATG
ACATCTAAGGATAGAGTAGTTGATTTACTTGATAAAGCACAATTATTGGAGGATGCAGATGTAAGTCAAATTAATTTGTC
TGAAAAATTAACAGATCAAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGGAGTAAACA
GTGTGCATGTAAAAAATGGGAACACAAATAATACTAAAGTAAATTTAAATACCGCATCTGTATCAGAATTGATGTCTGTT
CCTGGAGTAGGGCAAGCTAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTT
GAAAAAAGTAAAAGGTTTTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGATATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(143-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

99.517

100

0.995
  comEA Staphylococcus aureus N315

96.618

100

0.966