Detailed information NTG0815844

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: R1T10_RS05535
• Genome accession: NZ_CP136807
• Coordinates: 1129298..1130542 (+)
• Length: 414 a.a.
• NCBI ID: WP_002216990.1
• Uniprot ID: -
• Organism: Neisseria meningitidis NMB
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1124298..1135542

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R1T10_RS05515	-	1124801..1126903 (-)	2103	WP_017200990.1	DNA methyltransferase	-
R1T10_RS05520	truB	1127223..1128143 (-)	921	WP_017200991.1	tRNA pseudouridine(55) synthase TruB	-
R1T10_RS05525	-	1128201..1128725 (-)	525	WP_025462958.1	hypothetical protein	-
R1T10_RS05530	rbfA	1128736..1129107 (-)	372	WP_002213189.1	30S ribosome-binding factor RbfA	-
R1T10_RS05535	clpX	1129298..1130542 (+)	1245	WP_002216990.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
R1T10_RS05540	-	1130607..1131800 (-)	1194	WP_002239812.1	aspartate aminotransferase family protein	-
R1T10_RS05545	-	1132204..1132704 (+)	501	WP_025462959.1	hypothetical protein	-
R1T10_RS05550	-	1132789..1133343 (+)	555	WP_002216993.1	hypothetical protein	-
R1T10_RS05555	-	1133357..1133557 (+)	201	WP_017200995.1	hypothetical protein	-
R1T10_RS05560	-	1133985..1135373 (-)	1389	WP_002226287.1	DEAD/DEAH box helicase	-

Sequence

Protein

• Length: 414 a.a.
• Molecular weight: 45101.45 Da
• Isoelectric Point: 4.8213

>NTDB_id=815844 R1T10_RS05535 WP_002216990.1 1129298..1130542(+) (clpX) [Neisseria meningitidis NMB]
MSNENRTCSFCGKSKSHVKHLIEGENAFICDECVSNCIEILHEDGNDGTPSESAGGEPEESGKLPTPAEIVANLNDHVIG
QEQAKKALAVSVYNHYKRLRHPKAGANVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ
IITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDT
TNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSKDENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDA
LINILTEPKNALVKQYQALFGMENVELEFEEGALRSIAWQAMERKTGARGLRSIVERCLLDTMYRLPDLQGLKKVVVGKA
VIEEGKEPELVFES

Nucleotide

• Length: 1245 bp

>NTDB_id=815844 R1T10_RS05535 WP_002216990.1 1129298..1130542(+) (clpX) [Neisseria meningitidis NMB]
ATGTCCAACGAAAACCGTACCTGTTCCTTTTGCGGAAAATCCAAATCACACGTCAAACATTTAATTGAGGGCGAAAACGC
CTTTATCTGTGACGAATGCGTCTCAAACTGTATTGAAATATTGCATGAAGACGGAAATGACGGCACGCCTTCGGAAAGTG
CCGGAGGGGAGCCGGAAGAATCCGGCAAGCTGCCCACGCCCGCCGAAATCGTCGCCAACCTCAACGACCACGTTATCGGT
CAGGAACAAGCCAAGAAAGCCTTGGCGGTGTCGGTGTACAACCATTACAAACGCCTGCGCCACCCGAAAGCCGGAGCTAA
TGTCGAATTGTCGAAATCCAACATCCTGCTTATCGGCCCGACCGGATCGGGTAAAACCCTGCTGGCGCAATCTTTGGCGC
GCAAACTGGATGTGCCGTTCGTGATGGCAGATGCAACCACGCTGACCGAAGCAGGTTATGTCGGCGAAGATGTCGAACAG
ATTATTACCAAACTGTTGGGCAAATGTGATTTCGATGTCGAAAAAGCCCAACGCGGCATCGTCTATATCGACGAAATCGA
TAAAATTTCACGCAAAAGCGACAATCCGTCCATCACGCGTGACGTGTCCGGCGAAGGCGTGCAACAAGCCTTGCTGAAAC
TGATTGAAGGTACGGTGGCCAGCGTTCCGCCCCAAGGCGGCCGCAAGCATCCGAATCAGGAATTTATCAACGTCGATACC
ACCAACATCCTGTTTATCTGCGGCGGCGCGTTTGCAGGCTTGGAAAAAGTCATCCGCCAGCGTACTGAAAAAGGCGGTAT
CGGTTTCGGTGCGTCCGTTCACAGCAAGGACGAAAATGCCGACATTACCAAGCTGTTCGGCATCGTCGAACCGGAAGATT
TAATCAAATTCGGTCTGATTCCGGAATTAATCGGACGTTTGCCTGTGATTGCAACGTTAGAAGAACTGGATGAGGACGCG
CTGATTAATATTTTGACCGAGCCGAAAAACGCTTTGGTCAAGCAGTATCAAGCCTTGTTCGGTATGGAAAATGTCGAGTT
GGAATTTGAAGAAGGCGCATTGCGTTCCATTGCGTGGCAGGCAATGGAGCGCAAAACCGGCGCGCGCGGCCTGCGTTCCA
TCGTCGAACGCTGCCTGCTCGATACGATGTACCGCCTGCCTGATTTGCAAGGCTTGAAAAAAGTGGTGGTCGGTAAGGCA
GTCATCGAAGAGGGCAAGGAACCGGAATTGGTGTTCGAGTCCTGA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (316-387)

• AAA domain (Cdc48 subfamily) (AAA_2) (112-310)

• ClpX C4-type zinc finger (zf-C4_ClpX) (7-43)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	55.797	100	0.558
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.39	99.034	0.539