Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   P8596_RS08375 Genome accession   NZ_CP122397
Coordinates   1595055..1595243 (+) Length   62 a.a.
NCBI ID   WP_034763435.1    Uniprot ID   A0A366EMK4
Organism   Rossellomorea sp. DA94     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1590055..1600243
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P8596_RS08355 (P8596_08355) - 1592071..1592238 (-) 168 WP_263497663.1 YjzD family protein -
  P8596_RS08360 (P8596_08360) - 1592503..1593246 (+) 744 WP_224520461.1 hydrolase -
  P8596_RS08365 (P8596_08365) - 1593269..1593988 (+) 720 WP_279726575.1 hypothetical protein -
  P8596_RS08370 (P8596_08370) med 1594090..1595058 (+) 969 WP_279726577.1 BMP family ABC transporter substrate-binding protein Regulator
  P8596_RS08375 (P8596_08375) comZ 1595055..1595243 (+) 189 WP_034763435.1 ComZ family protein Regulator
  P8596_RS08380 (P8596_08380) - 1595461..1596393 (+) 933 WP_159361745.1 beta-ketoacyl-ACP synthase III -
  P8596_RS08385 (P8596_08385) fabF 1596445..1597689 (+) 1245 WP_224520457.1 beta-ketoacyl-ACP synthase II -
  P8596_RS08390 (P8596_08390) - 1597782..1598543 (+) 762 WP_279726579.1 DUF2268 domain-containing putative Zn-dependent protease -
  P8596_RS08395 (P8596_08395) - 1598680..1598889 (+) 210 WP_034763443.1 hypothetical protein -
  P8596_RS08400 (P8596_08400) - 1598985..1599734 (+) 750 WP_034763445.1 YjbA family protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7280.37 Da        Isoelectric Point: 4.2508

>NTDB_id=815338 P8596_RS08375 WP_034763435.1 1595055..1595243(+) (comZ) [Rossellomorea sp. DA94]
MNQDKTMEFMQIAMKYFPQAKEQLDQAGVEFSPEMLQPFMTLFTQVMSEAYELGKQDALHKE

Nucleotide


Download         Length: 189 bp        

>NTDB_id=815338 P8596_RS08375 WP_034763435.1 1595055..1595243(+) (comZ) [Rossellomorea sp. DA94]
ATGAATCAAGACAAAACAATGGAATTTATGCAAATTGCCATGAAGTATTTCCCTCAAGCGAAGGAACAACTCGATCAAGC
GGGAGTCGAGTTCTCTCCTGAAATGCTGCAGCCATTCATGACGCTGTTCACTCAAGTCATGAGTGAAGCCTATGAATTAG
GCAAACAGGATGCCTTACATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A366EMK4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

65.517

93.548

0.613