Detailed information NTG0815009

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: RZV12_RS00650
• Genome accession: NZ_CP136552
• Coordinates: 131298..132707 (-)
• Length: 469 a.a.
• NCBI ID: WP_001188776.1
• Uniprot ID: Q3YVA5
• Organism: Escherichia coli O104:H4 strain rpoS_ATGtoATA
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 126298..137707

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RZV12_RS00625	yihA	127601..128233 (-)	633	WP_000183349.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
RZV12_RS00630	-	128530..128696 (+)	167	Protein_110	hypothetical protein	-
RZV12_RS00635	yihI	128815..129324 (+)	510	WP_001350037.1	Der GTPase-activating protein YihI	-
RZV12_RS00640	hemN	129513..130886 (+)	1374	WP_000116090.1	oxygen-independent coproporphyrinogen III oxidase	-
RZV12_RS00645	yshB	131076..131186 (-)	111	WP_000893994.1	YshB family small membrane protein	-
RZV12_RS00650	luxO	131298..132707 (-)	1410	WP_001188776.1	nitrogen regulation protein NR(I)	Regulator
RZV12_RS00655	glnL	132719..133768 (-)	1050	WP_000190577.1	nitrogen regulation protein NR(II)	-
RZV12_RS00660	glnA	134054..135463 (-)	1410	WP_001271717.1	glutamate--ammonia ligase	-
RZV12_RS00665	typA	135836..137659 (+)	1824	WP_000570668.1	ribosome-dependent GTPase TypA	-

Sequence

Protein

• Length: 469 a.a.
• Molecular weight: 52268.77 Da
• Isoelectric Point: 6.4561

>NTDB_id=815009 RZV12_RS00650 WP_001188776.1 131298..132707(-) (luxO) [Escherichia coli O104:H4 strain rpoS_ATGtoATA]
MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVII
MTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQQQPRNIQLNGPTTDIIGEAPAMQDVFRIIGRLSRS
SISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDE
IGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPR
LARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESTVAESTSQMQPD
SWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME

Nucleotide

• Length: 1410 bp

>NTDB_id=815009 RZV12_RS00650 WP_001188776.1 131298..132707(-) (luxO) [Escherichia coli O104:H4 strain rpoS_ATGtoATA]
ATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGTTGGGTGCTTGAACGTGCGCTCGCTGGAGCGGG
TTTAACCTGTACGACATTTGAGAACGGCGCGGAGGTACTGGAGGCGCTGGCGAGCAAAACGCCGGATGTGCTGCTTTCAG
ATATCCGTATGCCGGGAATGGACGGGCTGGCACTGCTCAAGCAGATTAAACAGCGCCATCCGATGCTTCCGGTCATCATT
ATGACCGCACATTCCGATCTGGATGCTGCCGTCAGCGCCTATCAACAAGGGGCGTTTGATTATCTGCCCAAACCGTTTGA
TATCGACGAAGCCGTCGCGCTGGTTGAGCGCGCCATCAGTCATTACCAGGAACAGCAGCAGCCGCGTAATATTCAGCTTA
ACGGCCCAACGACCGATATCATCGGCGAAGCGCCAGCCATGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCT
TCTATTAGCGTGCTGATTAACGGCGAATCCGGCACCGGTAAAGAACTGGTCGCTCATGCCCTGCATCGCCACAGTCCGCG
CGCCAAAGCGCCGTTTATCGCGCTGAATATGGCAGCTATCCCAAAAGATTTGATCGAATCAGAACTGTTTGGCCACGAGA
AAGGCGCGTTTACTGGCGCGAATACCATTCGTCAGGGGCGTTTTGAACAGGCCGATGGCGGTACATTATTCCTCGACGAA
ATTGGTGATATGCCGCTGGATGTGCAGACGCGTTTGCTGCGCGTGCTGGCAGACGGTCAGTTTTACCGCGTTGGCGGCTA
TGCGCCGGTGAAAGTGGATGTGCGGATTATCGCTGCCACTCACCAGAATCTCGAACAGCGAGTGCAGGAAGGTAAGTTCC
GTGAGGATCTGTTCCACCGCCTGAACGTTATCCGCGTTCATCTGCCGCCGCTGCGCGAACGTCGGGAAGATATTCCCCGT
CTGGCGCGCCATTTTTTACAGGTTGCCGCGCGCGAACTGGGCGTAGAAGCGAAGTTACTGCATCCGGAAACCGAAGCTGC
TCTGACGCGTCTGGCGTGGCCAGGCAACGTGCGCCAGCTGGAAAACACCTGCCGCTGGCTAACGGTGATGGCCGCCGGGC
AGGAAGTGTTGATTCAGGATTTGCCCGGCGAACTGTTTGAATCAACGGTTGCGGAGAGTACTTCGCAAATGCAACCGGAC
AGCTGGGCGACGCTTCTTGCGCAGTGGGCAGACAGAGCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGCC
AGAGCTGGAGCGGACGTTACTGACGACCGCGTTGCGACATACGCAGGGGCATAAACAGGAAGCGGCGCGGCTACTCGGCT
GGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGATGGAGTGA

Domains

Predicted by InterProScan.

• Response regulator receiver domain (Response_reg) (6-115)

• Bacterial regulatory protein, Fis family (HTH_8) (427-466)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

3D structure

• AlphaFold DB: Q3YVA5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	39.871	98.934	0.394
pilR	Pseudomonas aeruginosa PAK	39.066	100	0.392