Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   QA442_RS09590 Genome accession   NZ_CP121861
Coordinates   1827179..1827982 (+) Length   267 a.a.
NCBI ID   WP_003226427.1    Uniprot ID   -
Organism   Bacillus stercoris strain Mal05     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1822179..1832982
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QA442_RS09570 (QA442_09570) - 1822290..1823135 (+) 846 WP_095431669.1 TlyA family RNA methyltransferase -
  QA442_RS09575 (QA442_09575) argR 1823232..1823681 (+) 450 WP_003230265.1 arginine repressor ArgR -
  QA442_RS09580 (QA442_09580) recN 1823718..1825448 (+) 1731 WP_095431668.1 DNA repair protein RecN Machinery gene
  QA442_RS09585 (QA442_09585) spoIVB 1825623..1826903 (+) 1281 WP_069149849.1 SpoIVB peptidase -
  QA442_RS09590 (QA442_09590) spo0A 1827179..1827982 (+) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  QA442_RS09595 (QA442_09595) - 1828128..1828307 (+) 180 WP_014664554.1 hypothetical protein -
  QA442_RS09600 (QA442_09600) - 1828523..1829641 (-) 1119 WP_095431667.1 NADH-dependent flavin oxidoreductase -
  QA442_RS09605 (QA442_09605) - 1829714..1829866 (-) 153 WP_141237718.1 hypothetical protein -
  QA442_RS09610 (QA442_09610) - 1830174..1830470 (+) 297 WP_069150774.1 hypothetical protein -
  QA442_RS09615 (QA442_09615) - 1830490..1831110 (+) 621 WP_095431666.1 N-acetylmuramoyl-L-alanine amidase -
  QA442_RS09620 (QA442_09620) - 1831188..1831919 (+) 732 WP_095431665.1 glycerophosphodiester phosphodiesterase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29691.19 Da        Isoelectric Point: 6.3913

>NTDB_id=814911 QA442_RS09590 WP_003226427.1 1827179..1827982(+) (spo0A) [Bacillus stercoris strain Mal05]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=814911 QA442_RS09590 WP_003226427.1 1827179..1827982(+) (spo0A) [Bacillus stercoris strain Mal05]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAGCCTGTTGAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGCCTGTCGTTGTTTAAAGAAAAAGATCCCGATGTGCTCG
TATTAGATATTATTATGCCGCATTTAGACGGACTTGCGGTTTTAGAGAGGCTGAGGGAATCAGATCTGAAAAAACAGCCG
AATGTCATCATGCTGACAGCCTTTGGACAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGCGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGTCATATCCGCCAAGTCAGCGGAAATGCCAGCAGTGTGACGCATCGTGCGC
CATCATCGCAAAGCAGCATTATACGCAGCAGCCAGCCTGAACCAAAGAAGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCAGCCCATATTAAAGGCTATCTCTATCTGCGTGAAGCAATCTCAATGGTATACAATGACAT
CGAATTGCTCGGCAGCATTACAAAAGTCCTCTATCCGGACATCGCCAAAAAATTCAACACAACCGCAAGCCGTGTAGAAA
GAGCGATCCGCCATGCAATTGAAGTGGCATGGAGCAGAGGAAACATTGATTCCATTTCCTCGCTGTTCGGTTATACTGTC
AGCATGACAAAAGCTAAACCGACAAACAGCGAATTCATTGCAATGGTTGCGGATAAGCTTAGATTAGAACATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

100

100

1