Detailed information NTG0081429

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PPGU16_RS01710
• Genome accession: NZ_AP023174
• Coordinates: 386883..388040 (-)
• Length: 385 a.a.
• NCBI ID: WP_180721433.1
• Uniprot ID: -
• Organism: Paraburkholderia largidicola strain PGU16
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 381883..393040

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PPGU16_RS01690 (PPGU16_03370)	leuA	382040..383698 (-)	1659	WP_180721429.1	2-isopropylmalate synthase	-
PPGU16_RS01695 (PPGU16_03380)	ybiB	384211..385179 (-)	969	WP_180721430.1	DNA-binding protein YbiB	-
PPGU16_RS01700 (PPGU16_03390)	-	385418..386116 (+)	699	WP_180721431.1	fumarylacetoacetate hydrolase family protein	-
PPGU16_RS01705 (PPGU16_03400)	maiA	386151..386795 (+)	645	WP_180721432.1	maleylacetoacetate isomerase	-
PPGU16_RS01710 (PPGU16_03410)	pilA	386883..388040 (-)	1158	WP_180721433.1	signal recognition particle-docking protein FtsY	Machinery gene
PPGU16_RS01715 (PPGU16_03420)	rsmD	388340..388978 (+)	639	WP_180721434.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PPGU16_RS01720 (PPGU16_03430)	coaD	389096..389605 (+)	510	WP_007579686.1	pantetheine-phosphate adenylyltransferase	-
PPGU16_RS01725 (PPGU16_03440)	-	389750..390007 (+)	258	WP_180721435.1	YfhL family 4Fe-4S dicluster ferredoxin	-
PPGU16_RS01730 (PPGU16_03450)	hisC	390073..391152 (-)	1080	WP_180721436.1	histidinol-phosphate transaminase	-
PPGU16_RS01735 (PPGU16_03460)	pth	391190..391792 (-)	603	WP_180721437.1	aminoacyl-tRNA hydrolase	-
PPGU16_RS01740 (PPGU16_03470)	-	391914..392525 (-)	612	WP_180721438.1	50S ribosomal protein L25/general stress protein Ctc	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 41245.85 Da
• Isoelectric Point: 4.5296

>NTDB_id=81429 PPGU16_RS01710 WP_180721433.1 386883..388040(-) (pilA) [Paraburkholderia largidicola strain PGU16]
MFSFFKRFKGSKAPDDTPDAPQADSGADVDMQDVAEPEAPVARSQSVPDSADAPEFDPNYVPDAADFEETDDEAAEIVPP
PVPEAAAKRSWLTRLRSGLSKTSTSITGIFVGAKIDEDLYEELETALLMSDAGVDATEFLLEALREKVRAERLTDPQQVK
AALRTLLIDLLKPLEKSLTLGHYQPTVMMIAGVNGAGKTTSIGKLAKHMQNFNQSVLLAAGDTFRAAAREQLAIWGQRNN
VTVVQQESGDPAAVIFDAVGAARARKINVVMADTAGRLPTQLHLMEELRKVKRVVGKAMDGAPHEVLLVIDANTGQNALA
QVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAEEFSDALLG

Nucleotide

• Length: 1158 bp

>NTDB_id=81429 PPGU16_RS01710 WP_180721433.1 386883..388040(-) (pilA) [Paraburkholderia largidicola strain PGU16]
ATGTTCAGCTTTTTCAAACGATTCAAGGGTTCCAAGGCGCCCGACGACACGCCTGACGCGCCGCAGGCCGATTCCGGCGC
CGACGTCGACATGCAGGACGTGGCTGAGCCGGAAGCGCCCGTCGCGCGTTCGCAATCCGTCCCGGACTCGGCCGATGCGC
CTGAATTCGATCCCAATTACGTCCCCGACGCCGCCGACTTCGAAGAGACGGACGACGAGGCCGCCGAAATCGTCCCGCCG
CCGGTGCCCGAAGCCGCCGCGAAGCGTTCGTGGCTCACGCGCCTGCGAAGCGGTCTGTCGAAGACCAGTACGAGCATCAC
GGGCATTTTCGTCGGCGCGAAGATCGATGAAGACCTGTACGAAGAACTGGAAACGGCGCTGCTGATGTCCGACGCGGGCG
TCGACGCGACCGAGTTTCTGCTCGAAGCATTGCGCGAGAAAGTGCGCGCCGAGCGACTCACCGATCCGCAGCAGGTCAAG
GCCGCGCTGCGCACGCTGCTGATCGATCTGCTGAAGCCGCTGGAAAAGTCGTTGACGCTCGGCCATTACCAGCCGACCGT
GATGATGATCGCGGGCGTCAACGGCGCGGGCAAAACGACGAGCATCGGCAAGCTCGCGAAGCATATGCAGAACTTCAACC
AGTCGGTGCTGCTTGCCGCGGGCGACACGTTCCGCGCCGCCGCGCGCGAACAGCTTGCGATCTGGGGCCAACGCAACAAC
GTGACGGTCGTGCAGCAGGAAAGCGGCGATCCCGCTGCGGTGATTTTCGACGCCGTCGGCGCGGCGCGCGCCCGCAAGAT
CAATGTGGTGATGGCGGACACGGCCGGCCGTCTGCCGACGCAGCTTCATCTGATGGAAGAACTGCGCAAGGTGAAGCGCG
TGGTCGGCAAGGCGATGGACGGCGCACCGCATGAAGTGCTGCTCGTCATCGATGCCAACACCGGTCAGAACGCGCTCGCG
CAAGTGAAGGCTTTTGACGATGCGCTCGGCCTGACTGGCCTGATCGTGACGAAGCTCGACGGCACCGCGAAGGGCGGGAT
TCTCGCGGCGATCGCGCGACAACGTCCTGTGCCTGTGTACTTTATCGGCGTCGGTGAAAAGGTCGAAGATCTCCAGCCGT
TCAGCGCCGAAGAGTTTTCGGATGCGTTGCTGGGTTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (104-164)

• SRP54-type protein, GTPase domain (SRP54) (185-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.518	100	0.569