Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   KI219_RS21055 Genome accession   NZ_AP023089
Coordinates   4230040..4230501 (-) Length   153 a.a.
NCBI ID   WP_003181285.1    Uniprot ID   A0A1Y0YEG4
Organism   Bacillus paralicheniformis strain RSC-2     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 4225040..4235501
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KI219_RS21030 (RSC2_04338) - 4225389..4226558 (-) 1170 WP_026579794.1 aminotransferase A -
  KI219_RS21035 (RSC2_04339) - 4226750..4226908 (-) 159 WP_165389262.1 hypothetical protein -
  KI219_RS21040 (RSC2_04340) - 4227080..4227604 (+) 525 WP_020451188.1 RDD family protein -
  KI219_RS21045 (RSC2_04341) - 4227701..4229020 (+) 1320 WP_020451189.1 MFS transporter -
  KI219_RS21050 (RSC2_04342) - 4229094..4230011 (+) 918 WP_020451190.1 chemotaxis protein -
  KI219_RS21055 (RSC2_04343) kre 4230040..4230501 (-) 462 WP_003181285.1 YkyB family protein Regulator
  KI219_RS21060 (RSC2_04344) - 4230643..4231944 (-) 1302 WP_096748073.1 MFS transporter -
  KI219_RS21065 (RSC2_04345) - 4232033..4232530 (-) 498 WP_020451193.1 L,D-transpeptidase family protein -
  KI219_RS21070 (RSC2_04346) - 4232708..4233565 (-) 858 WP_023857290.1 metallophosphoesterase -
  KI219_RS21075 (RSC2_04347) fadH 4233712..4234476 (+) 765 WP_096748074.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17600.40 Da        Isoelectric Point: 10.6730

>NTDB_id=81396 KI219_RS21055 WP_003181285.1 4230040..4230501(-) (kre) [Bacillus paralicheniformis strain RSC-2]
MDDHNHTKELKPTVENLSKAIYTVNRHAKTATNPKYLYLLKKKALQKLLNEGKGKKVGLHFSKNPRFSQQQSDVLISLGD
YFFHMPPTKEDFANLPHLGTLNHSYRNPKAHMSLNIAKQLLQNYTGIKEKPLVTNRKRPASKPVFKKLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=81396 KI219_RS21055 WP_003181285.1 4230040..4230501(-) (kre) [Bacillus paralicheniformis strain RSC-2]
ATGGACGACCATAATCATACGAAAGAATTAAAACCGACAGTTGAAAACCTTTCAAAAGCGATTTATACAGTTAATCGCCA
TGCAAAAACCGCGACTAATCCCAAATACCTGTATCTTCTGAAAAAGAAAGCTTTGCAAAAGCTGCTTAATGAAGGAAAGG
GTAAAAAGGTAGGCCTTCACTTTTCGAAAAATCCAAGATTCAGCCAGCAGCAGTCAGATGTGCTGATTTCTCTCGGAGAC
TACTTTTTTCACATGCCTCCAACAAAAGAAGACTTCGCAAACCTTCCACACTTAGGTACATTAAATCATTCGTATCGGAA
CCCTAAAGCTCATATGTCCTTGAATATAGCGAAACAGCTTCTTCAAAACTACACGGGAATTAAGGAAAAACCGCTCGTCA
CAAACCGGAAGCGCCCTGCCTCAAAGCCCGTCTTCAAGAAGCTTGGCGAAAGCTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Y0YEG4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

82.468

100

0.83

Multiple sequence alignment