Detailed information NTG0813491

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: RWV42_RS16110
• Genome accession: NZ_CP136173
• Coordinates: 3405167..3406480 (-)
• Length: 437 a.a.
• NCBI ID: WP_001289250.1
• Uniprot ID: A3M1Y8
• Organism: Acinetobacter baumannii strain ABO21-A049
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3400167..3411480

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RWV42_RS16095 (RWV42_16095)	-	3402056..3403582 (+)	1527	WP_000207467.1	fumarate hydratase	-
RWV42_RS16100 (RWV42_16100)	-	3403724..3404278 (+)	555	WP_000155519.1	DUF2059 domain-containing protein	-
RWV42_RS16105 (RWV42_16105)	-	3404303..3405019 (-)	717	WP_001269745.1	DUF2846 domain-containing protein	-
RWV42_RS16110 (RWV42_16110)	clpX	3405167..3406480 (-)	1314	WP_001289250.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
RWV42_RS16115 (RWV42_16115)	clpP	3406582..3407187 (-)	606	WP_000289452.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	-
RWV42_RS16120 (RWV42_16120)	tig	3407380..3408714 (-)	1335	WP_001198432.1	trigger factor	-
RWV42_RS16125 (RWV42_16125)	-	3409129..3411417 (+)	2289	WP_002013915.1	TonB-dependent siderophore receptor	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 48082.87 Da
• Isoelectric Point: 4.9985

>NTDB_id=813491 RWV42_RS16110 WP_001289250.1 3405167..3406480(-) (clpX) [Acinetobacter baumannii strain ABO21-A049]
MSEHPQGQKHCSFCGKTQSEVGKLIAGEDAYICNECVDVCLDLVQTSQQVEAGDWASKALPKPHEIRAALDQYVIGQDLA
KKTLSVAVYNHYKRLKVGQSGHVSKDVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENI
VQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGGRKHPQQEFIQIDTS
NILFICGGAFAGLEKIVQQRQEKGGIGFTADVKNKDETKKLAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEAL
MQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDLPSRTDVGTVFINEAV
INGEAEPVYKSERQPKEAVTHESVAKADLKVIDSKSA

Nucleotide

• Length: 1314 bp

>NTDB_id=813491 RWV42_RS16110 WP_001289250.1 3405167..3406480(-) (clpX) [Acinetobacter baumannii strain ABO21-A049]
ATGTCCGAACATCCTCAAGGACAAAAACATTGTTCATTTTGCGGTAAAACGCAGTCTGAAGTCGGGAAACTGATTGCGGG
CGAGGACGCATATATTTGTAATGAGTGTGTAGATGTCTGCTTAGACCTTGTACAAACCAGCCAACAGGTTGAAGCAGGTG
ACTGGGCGAGCAAGGCATTGCCAAAACCACATGAAATACGTGCTGCGCTTGATCAATATGTAATTGGTCAGGATCTTGCC
AAAAAGACATTATCTGTTGCCGTTTATAACCATTATAAGCGTTTGAAAGTCGGGCAATCTGGTCATGTGTCTAAAGATGT
GGAAATTGCTAAAAGTAACATTCTACTGATTGGGCCTACCGGTTCAGGTAAAACATTACTTGCTCAAACATTGGCTCGTT
TGTTAGATGTGCCGTTTGCAATGGCAGATGCGACTACTTTGACTGAAGCGGGTTATGTTGGCGAAGACGTTGAAAATATC
GTACAAAAACTTTTGCAAAAAGCAGATTACGATGTAGAAAAAGCTCAAAAGGGCATTATTTATATCGATGAAATCGACAA
GATTACACGTAAATCTGAAAATCCGTCGATTACTCGCGACGTGTCTGGTGAAGGTGTACAACAAGCTTTGCTTAAGATGA
TTGAAGGTACTGTAGCTTCAATTCCACCACAAGGTGGACGTAAGCATCCGCAGCAAGAGTTCATTCAAATTGATACCTCA
AATATTCTATTTATTTGTGGTGGTGCGTTTGCTGGACTGGAAAAAATTGTACAACAGCGTCAAGAGAAAGGCGGAATTGG
CTTTACAGCTGATGTTAAAAACAAAGATGAAACCAAAAAACTTGCTGAATTATTCCGTCAAGTTGAGCCAACCGATTTGG
TTAAATTTGGTTTAATTCCAGAATTCATTGGCCGTTTACCAGTGATTGCAACGCTTGAAGAGCTTGATGAAGAAGCGTTA
ATGCAAATTTTGACTGAACCGAAAAATGCATTAACTCGTCAGTATCAATACCTGTTCAATATGGAAAATGTTGACCTCGT
ATTTGAAGATTCAGCTTTACGTGCAGTGGCTAAGCGTGCGCTTGAGCGTAATACCGGAGCTCGTGGCCTACGTTCGATTT
TGGAAAATGTTCTACTTGAAACGATGTATGACTTGCCAAGCCGTACAGATGTAGGAACAGTTTTCATTAATGAAGCAGTT
ATTAATGGTGAAGCTGAACCTGTCTACAAGTCAGAACGTCAGCCTAAAGAAGCTGTAACACATGAAAGTGTTGCTAAGGC
AGATTTAAAAGTAATTGATTCGAAGTCTGCTTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (315-390)

• ClpX C4-type zinc finger (zf-C4_ClpX) (9-45)

• AAA domain (Cdc48 subfamily) (AAA_2) (111-309)

3D structure

• AlphaFold DB: A3M1Y8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	59.453	91.991	0.547
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.426	92.449	0.531